KEGG   Poecilia reticulata (guppy): 103475214
Entry
103475214         CDS       T05149                                 
Name
(RefSeq) hypoxia-inducible factor 3-alpha-like isoform X1
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret04137  Mitophagy - animal
pret04140  Autophagy - animal
pret04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pret00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    103475214
   04137 Mitophagy - animal
    103475214
   04148 Efferocytosis
    103475214
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pret03000]
    103475214
Transcription factors [BR:pret03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    103475214
SSDB
Motif
Pfam: PAS_11 PAS_3 PAS HIF-1 PAS_9 PAS_4
Other DBs
NCBI-GeneID: 103475214
NCBI-ProteinID: XP_008424883
Position
LG13:complement(32152754..32170689)
AA seq 674 aa
MEKEDGVVAVKRSSSEQRKLRSRDAARCRRSQETEVFYELARTLPLPRRVCTHLDKAGIM
RVTLSFLRMQQLLRPEESVKKEEEEEDEDPMDAFFPQALAGFVMVMTEEGDMVFLTENVN
KHIGITQLELIGQSVYDFIHPCDQEELRDLLTPRPGLSKKLMAEQPSERNFFLRMKSTLT
SRGRTVNIKSATWKVLHCTGHIRPFGSASPPAARVMTLLCEPISHPSSVEFPLDSCTFLT
RHTMDLRFTHCEGRVTELVGYKPEDLIGRSAYEFYHALDSDRIKKSLLTLLSKGQVNTSP
YRFLANSGGFVWAETQATVLYNNKTSQPEAVVCLNFILSAVEQPDVVLSVEQTRCSLLPK
TKPSSPERAAEDSGISDTCDSDGEEAGGSAKLLLGLTEKPEELLQLEDGGEPPLTAGGVE
LSFASPPSPDTVPDHPKDLCSPRLRQLLSPIFDGLNPSSSPAASSEPDLVTEPPLLTSEC
SGSGLTAGLRPAQSPCEDEAMDTSEVERFFTICPEETQLKEQAAEDVEGKELEMYAPYIS
MDDDFQLTFLSNLPQEAGKPASLLLQGADGIPAVTVSRKRTHDLDKEPPPLLLIQDKRHK
PDPTSIEEELLLSHRLLGSLEDGDQSDLVLDSGRSQLLTDRDPVLSELCDTAALMRDIFV
PRPADLSPPLSPMT
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggagaaggaagacggggtcgtggcggttaaacggagcagctcggagcagaggaagctc
cgctctcgcgatgcggcccgctgccggcgcagccaggagaccgaggtgttctacgaactg
gcccggaccctgccgctgccgcgccgagtctgcacccacctggacaaggccggcatcatg
agggtgacgctcagcttcctgcggatgcagcagctcctgcgacccgaagagagtgtgaag
aaggaggaagaggaggaggatgaagatccgatggacgccttctttccccaggcgttggcg
ggcttcgtcatggtgatgaccgaggagggggacatggtgttcctgacggagaacgtcaac
aagcacatcggcatcacgcagctggagctgatcggtcagagcgtctacgacttcattcat
ccctgcgaccaggaggagctgcgagacctgctgactccgcgtccaggtctgagtaagaag
ctgatggcggagcaaccgagcgagaggaacttcttcctgcggatgaagagcaccctgacc
agcagggggcgcaccgtcaacatcaaatctgccacctggaaggttctccactgcacgggc
cacatccgcccgtttggctcagcgtcgccccctgctgccagagtgatgacgctgctgtgc
gagccgatcagccacccgtccagcgtggagttccctctggacagctgcaccttcctgacg
cgccacaccatggacctgcgcttcacccactgcgagggcagggtaacggagctggtgggg
tacaaaccggaggacctgattggacgctcggcctacgagttttatcacgcgctcgactcg
gatcgcatcaagaagagcctgctgacacttctgtccaaaggtcaggtcaacacgtcgccc
taccgcttcctggccaacagcggcggcttcgtgtgggccgagactcaggccaccgtcctc
tacaacaacaagacgtcgcagcccgaagccgtcgtctgcctcaacttcatcctcagcgcg
gtggagcagccggacgtggtgttgtccgtcgagcagacccgctgcagcctcctgcctaaa
accaagccgtcctccccggagcgcgccgccgaggacagcggcatctccgacacctgcgac
tcggacggcgaggaagccggcggctcggcgaagctcctcctggggctgacggagaaaccg
gaggagctgctgcagctggaggacggcggggagccgccgctgacggcaggtggggtggag
ctgtcgttcgccagtcctcccagtccagacacggttccggaccatcctaaggatctgtgc
agccctcggctgcggcagctgctgtcgcccatcttcgacggtctgaatccgtcctcgtcg
ccggccgcctcctctgagccggacctggtaaccgagcctcctcttttaaccagcgaatgt
tctggttctggtctgactgctggtctccgtccggcccagagcccctgtgaggacgaggcg
atggacaccagcgaggtggagcgtttcttcaccatctgcccggaggaaacgcagctcaag
gaacaagctgccgaggacgtggaggggaaggagctggagatgtacgcgccgtacatctcc
atggacgacgacttccagctcaccttcctcagcaatctgccgcaggaagccggcaaaccc
gcctcgctgctgctccagggcgccgatgggattcctgccgtcaccgtcagcaggaagagg
acccacgacttggacaaagagccgccgcctctgctgctgatccaggacaagaggcacaaa
ccggacccgacctccatagaggaggagctgctgctcagccacaggctgctgggttcgctg
gaagacggcgaccagtcggatctggttctggactccggacgcagtcagctgctcacagac
agagacccggttctgtcagaactgtgcgacaccgcagctctgatgagggacatcttcgtc
cctcggccggctgatctgtcgccgccgctctcgcccatgacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system