KEGG   Poecilia reticulata (guppy): 103479618
Entry
103479618         CDS       T05149                                 
Symbol
tnn
Name
(RefSeq) tenascin-N isoform X1
  KO
K06252  tenascin
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret04510  Focal adhesion
pret04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:pret00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103479618 (tnn)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103479618 (tnn)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pret00536]
    103479618 (tnn)
Glycosaminoglycan binding proteins [BR:pret00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103479618 (tnn)
SSDB
Motif
Pfam: fn3 Fibrinogen_C EGF_2 Pur_ac_phosph_N Arylsulfotran_N EGF_Tenascin DUF460 DUF5435
Other DBs
NCBI-GeneID: 103479618
NCBI-ProteinID: XP_008432379
Position
LG17:17821301..17877899
AA seq 948 aa
MSAGLLWRALCLLIILCTVSHHVRCTDNQPDSSGTEQGLTFSHIYKLDIPGSSGCTVEHL
PTHKTGLQQDTXTNGENDIIFKHNIRLQTPKCDCEESESFKDLLYRINGLEEEVTYLKTQ
CTQGCCGRGGVAGVDTSCSGHGTYQQDTCSCLCNPGWESPDCSVSSCPDECNDNGRCVDG
KCVCYEGYTGEDCSQLACPGDCNDKGQCRDGKCVCFPHFTGEDCSTPTCPNDCGGNGQCV
DGQCVCEEGFYGEDCSLVLTPQGLRLVQVTDVSLLVEWESVQGAEYYMLTYHPKFDXGAM
EEVRISNSENSYRITGLTPGVTYVVQVYAVIKKIQSEADMIEATTDVSTVDDMQVIGQTE
VSIQVDWKNPQAEVDYFRLTHTDPSGQEEELNVQRSQEARTKYTIVGLYPGTEYQISVQP
IKGNTKGKASFATGVTDIDAPTNFVTTEVTEDTATVSWDKAQAEIQGYMLSYTSAEGSSS
DIFVGRGSTSYRLVGLRPGVVHTVYIWAFKGDKVSGKSSTEAETELDAPTNLSVEDETDS
SFRVYWDPTEAQIDGYMLAYSSSDGSREETPVGSDSSYALTGLRPGVFYTVYVWAVRGSK
ASRKTSTQAETELDAPANLVAHDETESSFSLSWDPVQAEIDGYILTYTSIDGSSKEIPLG
PNSTSYLLTGLRPAVLYTVYIKASRGDKTSRTISTQAETEIDSPKDLKASDVTQDSASLT
WVPPLADIDGYILTYRDEEGKLQTIENRLDSRKRRFAASKLERGKRYIVTIYAFRGSKRS
KVVETFFKTVALLYPFPMDCGQIMKNGNKNNGVYTVYINNNQSKPIQVYCDMTTDEGGWL
VLQRRNTGNLDFMRRWRQYIAGFGNLTEEFWIGLDKIHELTNTPTQYEIRFDLGLGSDRA
YAIYDNFKIAPVRQRFKLTIGKYRGTAGGSQHVKVCVCENWKHCFHKL
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgagcgctggactcctgtggagggccctgtgcctgctgattatactttgcactgtgtca
caccatgtgcgctgyacagacaaccagccagattcctctggcacagagcagggactcacc
ttcagccacatctataagcttgacatcccaggaagctctggttgcaccgtggagcatctg
ccaacacacaagacaggtctgcagcaagataccrtaaccaatggagaaaatgacatcatc
tttaaacataacattaggctgcaaacacccaagtgtgattgtgaggaatcagaaagcttc
aaagacctactgtacagaatcaatggactggaagaagaagtcacctacctaaagacccag
tgcactcaaggatgctgtggaagaggaggtgttgcaggtgtagacacaagctgcagtggt
catggtacctaccagcaagacacctgcagctgcctttgtaacccaggatgggaaagccct
gactgctccgtgtcctcctgccccgatgagtgcaacgacaatggccgatgtgtagatggg
aaatgcgtatgctatgagggttacacaggagaagactgcagccagctggcatgtccaggc
gactgcaatgataaggggcagtgcagagatggaaaatgtgtgtgtttccctcattttacc
ggtgaagactgcagtaccccgacgtgtcctaatgactgcggtggcaatgggcagtgtgtg
gatggtcaatgtgtctgtgaagaaggcttctatggagaggattgttctttagtcctcaca
cctcagggtctgaggttggtccaagtgacggatgtttctctcctggtggagtgggagtct
gtccaaggggcagagtattacatgctgacctatcatcctaaatttgatragggtgccatg
gaggaggttcggatttccaactcagagaattcctaccgcattacgggactcacacctggt
gttacctacgttgtccaagtctacgctgtcatcaaaaagattcagagtgaagcagatatg
attgaagccaccacggatgtctcaactgttgatgatatgcaagtcattggccagacagag
gtttccatccaagtggactggaagaacccacaggcagaagtggattacttcagactgaca
catactgacccatcrggacaggaggaggagctgaacgttcagaggagtcaagaagcacgc
accaagtacactattgtgggtctatatcccggaacagagtatcaaatttctgtgcagccc
atcaaagggaacaccaaaggaaaagcttctttcgcaaccggtgtyacagacatcgatgca
ccaacaaactttgtcactactgaagtaactgaagacaccgcaaccgtctcctgggataaa
gcccaggcggaaatccaaggctacatgttgagctacacgtctgctgaaggctccagctcg
gacatctttgtagggcgtggcagcacctcctacaggctggttggtctgaggcctggggtc
gtccacacggtctacatctgggccttcaagggagacaaagtcagtgggaagagttcaact
gaagccgaaacagagttggatgctcctactaacctttcagtcgaagatgagacagactcc
agcttcagagtttactgggatcccaccgaggcacaaattgatggctacatgctcgcctat
agctcctctgatgggtcgagggaggaaaccccagttggatctgatagctcttatgcgctc
actggccttaggccaggggtcttctacactgtctatgtctgggctgtcaggggaagcaaa
gccagcaggaagacctcaacacaagctgagacagagctggacgccccagcgaacctcgta
gctcacgatgaaaccgagtccagcttcagcctttcctgggatccagtccaggcagaaatt
gatggctacatcctaacctacacctccattgatggatctagtaaagaaatccctttgggc
cccaacagcacctcttatttgctgactggtttaaggcctgcagtcctctacactgtctac
atcaaagcctcaaggggagacaaaaccagcaggacaatatccacacaagctgagacagaa
atcgactcccctaaggacctaaaggcttcagatgtgacgcaggattcagcttccttgact
tgggttcctcctctggccgacattgatggctatatcctcacctatagagacgaagaagga
aaattacagactattgaaaataggctagattccaggaagagacgctttgctgcatccaag
ctggagaggggaaagaggtacattgtcaccatttacgcctttaggggcagcaaaaggagt
aaggtggtggagactttcttcaaaacagttgctctgctgtaccccttccctatggactgt
ggacaaataatgaagaacggcaataaaaacaatggcgtctatactgtctacattaataat
aaccaatccaagccaatacaggtttactgtgacatgaccaccgacgaaggcggttggctg
gtacttcagcggcgtaacactgggaatctggacttcatgagacgctggaggcagtacata
gcaggctttggcaacctgacagaggagttctggattggtttggataagatacacgagcta
accaacactcccacgcagtacgagatcaggttcgacttgggcctgggctcagatagagcg
tacgccatttacgacaactttaagatcgctccggtcagacagagattcaagctcaccatt
ggcaaatacagagggacagcaggtgggtctcagcatgtaaaagtttgtgtatgtgagaac
tggaagcactgctttcataaattataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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