KEGG   Poecilia reticulata (guppy): 103481408
Entry
103481408         CDS       T05149                                 
Name
(RefSeq) integrin alpha-M-like isoform X3
  KO
K06461  integrin alpha M
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret04145  Phagosome
pret04514  Cell adhesion molecules
pret04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pret00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    103481408
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    103481408
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    103481408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pret04131]
    103481408
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pret04147]
    103481408
   04515 Cell adhesion molecules [BR:pret04515]
    103481408
   04090 CD molecules [BR:pret04090]
    103481408
   00536 Glycosaminoglycan binding proteins [BR:pret00536]
    103481408
Membrane trafficking [BR:pret04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    103481408
Exosome [BR:pret04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103481408
Cell adhesion molecules [BR:pret04515]
 Integrins
  Integrin alpha subunits
   103481408
CD molecules [BR:pret04090]
 Proteins
  103481408
Glycosaminoglycan binding proteins [BR:pret00536]
 Heparan sulfate / Heparin
  Adhesion molecules of cell surface
   103481408
SSDB
Motif
Pfam: VWA ITGAX-like_Ig_3 FG-GAP Integrin_A_Ig_2 VWA_2 Integrin_A_Ig_1 FG-GAP_3 FG-GAP_2 vWA-TerF-like
Other DBs
NCBI-GeneID: 103481408
NCBI-ProteinID: XP_008435035
Position
LG19:8975441..9024948
AA seq 1134 aa
MDWIIALALFCSVLKATFGFNVDSGSWTTLSEDDESFGYQVVQRRSDVLVSAPQLQYEKD
KRGRIYRCNPREKRCSKILALEQRAAVNMSLGLAMANDPSTQNTMVCGPTVPRDCTTITM
SNGLCYEIDRYDTIEKSYPSATEECRTQADIAFLLDGSGSVAAEDFERMKEFVKKLIETF
LGRDTQFAITQFSNDPRTEYDFNTFNTSNWKSQIDNIRQLTSRTYTAKAIQNVVDDVFSP
QKGSRSNVKRILIVITDGESDDHQNLPAATQLADKKKIVRFVIGVGDAFTTDRAKEELKT
IASKPADDFVFEVGSFDALDKIRNNLQAKIFSIEGSQGTGETLKQEMSQEGFRAAYVSGY
IQMTMVGANQWKGGYKKYLLSNVLNNVTFEPSIEIDSYLGYSMAVAKTNDGPLTILGAPR
NEHKGFVMTVFKEQLRDQIRPVEQQTGEYFGAEVCAMDVDSDGETDLILISSPMYKDVDR
EGRVYVCELSGLDVQCHFHEPSEITTLRGDASVRGRFGSSLAVVADINADKFNDLAVGAP
LENDGQGSIYIFQGEGRGKINPTYSQRIAASAVQSGLKLFGISISQSSYDQSGDGLPDLA
VGSKGKVVILRSRPVVTVTATVSFNPDLIPTQNPDCSKPLASKATVCFMMNKLSHMNEAQ
AQVNFTLTLDTNRKIPNNRAEISKDVRHKSGSLNLNLNKEKCDNVVFFIKPCPDDSYNPL
NNELRFTFDGLVSGSNPRPSLSPQVQTTTLNSLGFKINCGADKVCEDNLKVDFNFTTSSV
VKVGIDELLNVTVFVENRGENSYNSRIILTYPVGLSYRKVKSEKGRIECNSVDSEDGITE
GKTVCSIDKPIFKTNSMAIFIVSYGHNTYSDLGRKIEVTANAISDNKHHSPSSEVYKNKD
IDVKYSVFITTESSLSYNNFTFGENAVQKPLEQKIKVTNTMRPLNFTVVIKVPVKLGDKD
IWMDTNSFQIPGCQSRGYEEPTVTDFVNTIKKKKILDCIVAKCRVFRCSKFMERNKDTTY
TISANISSGWIEQIGLSSAKFFLTSTASLEYDENQYIFFSTTSNNDPPVRKIEAAVEVFP
KPDFTKAIIGGIVGGLLILVLLTIGLYKAGFFKSKYNEMINENAGAEGDAPAEE
NT seq 3405 nt   +upstreamnt  +downstreamnt
atggactggataattgctctggcacttttctgttcagtgctaaaagctacattcggcttt
aatgttgattctgggtcttggacaactttgagtgaagatgatgaaagttttggctaccag
gtggtgcaaagacgatcagatgtgcttgtcagcgccccacaactgcagtatgaaaaggat
aaaaggggacggatatatcggtgcaacccaagagagaagagatgtagcaaaattcttgct
ctagagcaaagagctgcagtcaacatgtctcttggtttggcgatggcaaatgatccgtca
acacaaaacacaatggtctgtggtccaaccgttcccagagactgcacaactatcaccatg
tctaatggtttgtgctatgagatcgatcgatatgatacgattgaaaagtcttacccgtct
gcgactgaagagtgtcgaacccaagctgacattgcatttctgctggatggctcaggcagt
gtagctgctgaagatttcgagagaatgaaagaatttgtgaaaaagcttatagaaacattc
ctgggaagagatacacagtttgccattacccagttttccaatgatccaagaacagaatat
gactttaatacttttaacacttccaactggaaatcacagattgacaacatccgtcaatta
accagtagaacatatacagctaaagccatccaaaatgttgtggatgatgtcttctcacca
caaaagggttccaggtcaaatgtgaaaaggattttgatagtgattacagatggagagtca
gatgatcaccaaaacttaccagcagcaacacaattagctgataaaaagaaaatagttcga
tttgttattggggtgggggacgcattcacaactgatagagcaaaagaagagctcaaaacg
attgcatctaaacctgctgacgattttgtgtttgaagtgggaagctttgatgctcttgac
aaaatacggaacaatttgcaggccaaaattttttccattgaaggatctcaagggactggc
gagacactgaaacaagaaatgtctcaagaaggcttcagagcagcttatgtgtctgggtat
attcagatgactatggttggtgctaaccagtggaaaggaggctacaagaaatacttgctt
agtaatgtcttaaacaacgtcacatttgagccgtccattgagattgacagttaccttggt
tattccatggctgttgctaaaacaaacgatggtccactgacaattcttggtgctccaaga
aatgaacacaaaggatttgttatgacagttttcaaagaacaactgagagatcaaatcaga
cccgttgaacaacagactggtgaatattttggggctgaggtttgtgccatggatgtggat
tctgatggtgagactgatctaatcctcatatcctctccgatgtacaaagacgttgacaga
gagggacgagtttatgtctgtgaattaagtggtttggatgtgcaatgtcactttcatgaa
ccatcagaaataaccacactaagaggtgatgcgtctgtcagagggaggtttgggtcgtct
cttgctgttgtggctgacattaatgcagataaattcaatgatttggccgttggagctcct
ttggagaatgacggccaaggcagcatctacatattccaaggagaagggagaggaaaaata
aatcctacttactcacagagaattgctgcatctgcagtccaatcaggtctgaagttattt
ggcatctcaatcagtcagtcttcctatgatcagagtggtgatggacttcctgacttagca
gtgggttcaaagggaaaagttgtcatactcagatccagaccagttgtaacagtgactgcc
actgtgtcgttcaacccagatctgatcccaactcaaaacccagactgttcaaaaccactg
gcaagcaaggccactgtctgttttatgatgaacaagttgtctcacatgaatgaagctcaa
gcacaggttaatttcactttaacattggacacaaatcgcaagataccaaacaacagagct
gagatcagcaaggatgtgagacacaagagtggatcgcttaatcttaatttaaataaggag
aaatgtgataatgttgtcttctttatcaagccttgtccagatgattcttacaatcctctc
aataatgagctcagattcacatttgatggtttagtttctggctcaaacccaagaccaagc
ctttctccacaggttcaaaccacaaccttgaattctcttggcttcaagatcaattgtgga
gctgataaagtttgtgaagataacttgaaggtggatttcaacttcactacatcctcagtg
gttaaagttggaatagatgaacttctgaatgttactgtctttgtggaaaacagaggggaa
aattcctacaacagtcgcattattctcacatacccagttgggctctcctacaggaaggtt
aaatctgagaaaggaagaattgaatgcaactctgtggacagtgaggatggcataacagaa
ggaaagacagtctgtagcatcgacaaaccaatattcaaaaccaactctatggcaatcttc
atcgtctcctatggtcacaacacctacagtgatcttggtagaaagatcgaagtgactgcg
aacgccatcagtgacaataagcatcactccccttctagtgaagtctacaaaaacaaagac
attgatgtcaagtacagtgtttttattacaactgaaagctccctcagctacaacaatttc
acatttggagaaaatgctgttcagaaaccacttgagcaaaaaataaaggttactaacaca
atgagaccactaaattttactgtagtgatcaaagttcctgtaaaacttggtgacaaagac
atctggatggacacaaacagttttcagattccaggttgtcagagcagaggatatgaagaa
cccactgtcactgattttgttaatacaataaaaaaaaagaaaatattggactgcattgta
gcaaagtgcagagtgttcaggtgttccaagttcatggaaaggaacaaggacacaacgtac
accatctctgcaaacatcagctcgggatggatagaacagatcggactttcatctgctaag
ttcttcctgaccagtacagccagtctagaatacgatgagaaccagtacatcttcttctct
acaacctctaataatgatcctcctgttcgcaagattgaagcagcagtagaagtgtttcct
aaaccagatttcactaaagcgattataggaggaattgtgggagggttgctcattctggtt
ttacttactatcggtctgtataaggctggatttttcaaaagcaaatataatgagatgatt
aatgaaaatgcaggagccgaaggagacgcaccagcagaggaatga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (29)   

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