KEGG   Poecilia reticulata (guppy): 103481704
Entry
103481704         CDS       T05149                                 
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
pret  Poecilia reticulata (guppy)
Pathway
pret03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pret00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103481704 (dhx8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pret03041]
    103481704 (dhx8)
Enzymes [BR:pret01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     103481704 (dhx8)
Spliceosome [BR:pret03041]
 Complex C
  Other components
   Step II factors
    103481704 (dhx8)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C S1 Helicase_C HA2_N DEAD AAA_22 AAA_19 nSTAND3 AAA_16 Flavi_DEAD T2SSE TsaE PhoH ABC_tran Sigma54_activ_2
Other DBs
NCBI-GeneID: 103481704
NCBI-ProteinID: XP_008435618
UniProt: A0A3P9P6H6
Position
LG19:complement(16973645..16985270)
AA seq 1258 aa
MCFRLKRKRKLLLHPICLPSSTFVEQKQDSWKMADGGVDELSQLEYLSLVSKVCTELDNH
LGINDKDLAEFVISLAEKQPSFDGFKALLLENGAEFTDSLIGNLLRLIQTMRPPSKASTS
KASDVSIKPKSEKDRLKELFPALCKPNDPSPKRILDEDDVKVAADAMKELEMFMPSVSGA
DSKVSKSKSEKSRHRSRSRERERHRDRDRDRDRDRDRGGDRKRRHHSRSRSRSRSRSRDR
DRHRERDRDRDRDRDRDRGKRKDKSSRWSDRSPSPRKDLDKDSDRWKDKHVDRPPPEEPS
VGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKV
LSFTGSKTSLSMKDVDQDTGEDLNPNRRRNMGPEGGEDVSMRNPDRPSNLNLGHAPELEQ
DDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDDETGILPKVDDEEDEDLEIELV
EEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERRELKQAAREAEMDSIP
MGLNKHWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSILEQR
ESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVA
AMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDSELGQYAII
MLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY
PVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP
DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQ
KVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQR
TNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAE
FPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEGDH
LTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVR
VQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYM
REVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq 3777 nt   +upstreamnt  +downstreamnt
atgtgtttccggttgaaacggaaaaggaaattgcttttacatccaatatgtctgccgtcg
tcaacgtttgttgaacaaaaacaagactcgtggaaaatggcagacggcggagttgacgag
ttatcgcagctggaatatttgtccttggtgtcgaaggtctgcacggagctcgacaaccat
ctgggaattaatgacaaagatttagccgagtttgtcatcagtcttgctgaaaaacagccg
agcttcgatggattcaaagcacttttgctcgaaaatggagccgaattcactgattctctc
atcggcaacttgctcagactcatccagacgatgcgacctccttctaaggcatcgacaagt
aaagcctctgatgtttcaatcaagccaaaaagtgagaaagacaggttgaaggagctgttt
cctgctctgtgtaaacccaacgatccatcaccaaagcggattctggatgaagacgatgta
aaagtcgctgctgatgcgatgaargaactagagatgtttatgcccagtgtcagcggggcg
gactccaaagtcagcaagagcaaatcagaaaaaagcaggcatcgcagccgaagtagagaa
cgagagaggcacagagacagagaccgggacagagacagagacagggaccggggaggagac
aggaagaggcggcaccattcccgatcacgttccagatccagatctcgctcccgggaccgt
gaccggcacagggaaagagatcgggacagagacagagatcgggacagagatcgtggtaaa
agaaaggacaagtcttcccgctggtctgatcgttcacccagccccaggaaagacctggat
aaagactctgatcgctggaaagacaaacacgtggaccggcctcctcccgaggagccttct
gttggcgacatttacaacggcaaagtgaccagcatcatgcagtttggatgctttgttcag
ctggagggactaagaaaacgatgggagggtttggtccacatttctgagctgcgcagggag
ggtcgcgtcgcgaacgtggcggacgtcgtcagcaagggccagcgagtgaaagtaaaggtg
ctgtcgttcaccggctccaagacgagcctcagtatgaaggatgtggaccaggacacagga
gaagatctaaaccccaaccggagaaggaatatgggcccagaaggaggcgaggacgtctcc
atgaggaaccccgacaggcctagcaacctgaacctgggccacgcccccgagctggagcar
gacgacacgctggagcgcaagaggctcaccaagatctctgacccggagaagtgggagatc
aaacagatgattgctgcaaacgtcttgtccaaagaagaattyccagatttcgacgacgag
acgggaatcctccctaaggtggacgatgaagaggatgaggacctggagatcgagctsgtt
gaagaggaaccaccgtttttgaggggacacaccaaacagagcatggacatgagccccgtc
aagatcgtcaagaatccagacggctcgctgtcgcaggcggccatgatgcaaagcgctctg
gctaaggagaggcgggagctgaagcaggcggcccgagaggcagagatggactccatcccc
atggggctgaacaaacattgggtcgacccgctgccagacgtggacggcaggcagatcgct
gctaacatgaggggaatcggaatgatgcccaatgacattccagaatggaagaaacatgct
tttggagggaacaaggcctcgtacggaaagaagacccagctctccatcttggagcagagg
gagagtctgcccatctataaactaaaggagcagctcattcaggctgttcacgacaaccag
atcctgatcgtcatcggagagacgggctccgggaagaccacccagatcactcagtacctg
gcggaggcgggttacaccacccggggcaagatcggctgtacgcagccacgacgtgtcgcc
gccatgtcggtggccaagcgagtctctgaggagtacggttgctgtctgggacaggaggtg
ggttacaccatccgattcgaggactgcaccagccccgagacggtgatcaagtacatgaca
gacggtatgctgctgagggagtgtttgatcgactccgagttgggccagtacgccataatc
atgctggacgaagctcacgagagaaccatccacaccgatgtgctgtttggtctcctcaag
aagacggtgcagaagcgcacagacatgaagctgatcgtaacctcggccacgctggacgcc
gtgaagttctcccagtatttctacgaggcccccatcttcaccatcccgggcagaacgtat
ccagtggaggttctttacaccaaagaacctgagacggactacctggacgccagcctcata
accgtcatgcagatccatctgaccgagcctccaggcgacatcctggtctttttaaccggc
caggaagagattgacaccgcctgtgagattctctacgagaggatgaagtctcttggaccc
gatgtccctgaactcatcattctccctgtgtattctgctctgcccagcgagatgcagacc
agaatctttgacccagctcccccaggaagcagaaaggttgtcattgccaccaacatcgcg
gagacctctctgaccatcgacgggatctactacgtggtggacccgggctttgtcaagcag
aaggtctacaactccaagaccggcatcgatcagctggtggtgactcccatctcccaggcc
caggccaagcagagggcggggcgcgccggcaggacgggtcctgggaaatgttacaggctg
tacacggagagagcctacagagatgagatgctgaccaccaacgttcctgagatccagagg
actaacttggccagcactgtgctgtcgctaaaggccatgggcatcaaygacctcctctcc
tttgacttcatggatgctcctcccatggagactctgatcacggccatggagcagctttac
actctgggagctctggatgacgagggcttgctcacacgcctgggtagaaggatggcggag
tttcctctggagcccatgctgtgcaagatgctgatcatgtccgtccacctgggctgcagt
gaagagatgctgaccattgtttcaatgttgtctgttcagaacgtcttctacaggccmaag
gacaagcaggccctggctgaccagaagaaggcaaagttccaccagcctgagggcgaccac
ctaactctgctggccgtttacaactcctggaagaacaacaagttctccaacccctggtgc
tacgagaacttcatccaggctcgctccctgcgccgagcccaggatatccgcaaacagatg
ctggggattatggacagacataaactggacgtggtgtcttgcggcaaagccacggtgcgg
gtccagaaggccatctgcagcggtttcttcaggaacgctgccaagaaggatccccaggag
ggctacaggaccctcatagaccagcaagttgtttacatccacccatcaagtgccctgttc
aacagacagcctgaatgggtcgtgtaccatgagctggtgctgaccaccaaggagtacatg
agggaggtgaccaccatcgatccgcgctggctcgtagaattcgcgcccgcsttcttcaaa
gtctccgatcccactcgcctcagcaagcagaagaagcagcagcgcctcgagccgctgtac
aatcgatacgaagagccgaacgcctggagaatctcgcgcgccttcagacgccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (29)   

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