KEGG   Candidatus Peribacter riflensis: PeribacterA2_0991
Entry
PeribacterA2_0991 CDS       T04147                                 
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
prf  Candidatus Peribacter riflensis
Pathway
prf03030  DNA replication
prf03430  Mismatch repair
prf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:prf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PeribacterA2_0991
   03430 Mismatch repair
    PeribacterA2_0991
   03440 Homologous recombination
    PeribacterA2_0991
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:prf03032]
    PeribacterA2_0991
   03400 DNA repair and recombination proteins [BR:prf03400]
    PeribacterA2_0991
Enzymes [BR:prf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PeribacterA2_0991
DNA replication proteins [BR:prf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PeribacterA2_0991
DNA repair and recombination proteins [BR:prf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PeribacterA2_0991
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA PAZ_4
Other DBs
NCBI-ProteinID: ALM10350
UniProt: A0A0S1SRL2
Position
complement(1036382..1037344)
AA seq 320 aa
MLRPKDIVGHHAVRAQLEHDLETENVSHAYLFAGPRHLGKMTLARWFALRLLSAGVPEEA
EEHVRHACERMTHSDLFVLDQLWIADQCEDWGTIAQTSNAPQQEREKKKVKTDTIGIDDI
RALQERLQETATGKYRCCIIRSAERMQSEAANALLKILEEPPPSLVFIFTTQALSSLLPT
VVSRMRVFRFHPLSRPELLPLLDGVNEEDRQFILHLAQGAPGVAQELKHDPEALRIHRLV
HTKAVSFWRTRSLKERLQILDPLTERGEEADQLLLHLALALREQSPASGAWVHALHELAQ
GLRTNAHRGLMTQRFALRVS
NT seq 963 nt   +upstreamnt  +downstreamnt
atgctgaggcctaaggatatcgtcggccatcacgccgttcgcgcgcagctggagcatgat
cttgaaacggagaatgtcagccatgcctatctcttcgcggggccgcggcatctgggcaag
atgacgctggcgcgatggttcgcgctccggctgctcagtgccggtgtgcctgaagaagca
gaagagcacgtacgtcatgcctgcgaacggatgacgcactccgatctcttcgttttggac
cagctctggattgccgatcagtgcgaagattggggcacgatcgcgcagacatccaatgca
ccgcagcaggaacgtgaaaagaagaaagtgaagaccgatacgatcggcattgatgatatt
cgtgcactgcaggagagactgcaggagacagcgaccggaaagtaccggtgctgcatcatc
cgctcagcagaacgcatgcagtccgaagcggccaacgccctcctcaaaattctcgaggag
ccgccgccttctctcgtcttcatctttaccacccaagcactttcgtcgctcctccccacc
gtcgtttcgcgcatgcgcgtgtttcgtttccatccgctctcccgtcccgagttgcttccg
ctcctcgatggagtgaacgaggaagaccggcagttcatcctgcatctggcgcagggtgcc
cctggcgttgcgcaggaactcaagcatgatccggaggcgcttcgcattcatcggcttgtg
cacacaaaagccgtatctttctggcgcacgcgttcgctcaaagagcgcctgcagatcctt
gatccgctgacggaacgcggcgaggaggccgatcaacttctcctccacctcgctctggcg
cttcgcgagcaatctcctgcgtccggagcatgggtacatgccctccacgagctggctcag
ggcctgaggaccaatgcgcaccgcgggctcatgacacagcgctttgctttgcgcgtctcg
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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