KEGG   Paenibacillus riograndensis: PRIO_0441
Entry
PRIO_0441         CDS       T03849                                 
Name
(GenBank) putative ATP-dependent helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pri  Paenibacillus riograndensis
Pathway
pri03420  Nucleotide excision repair
pri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PRIO_0441
   03430 Mismatch repair
    PRIO_0441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pri03400]
    PRIO_0441
Enzymes [BR:pri01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PRIO_0441
DNA repair and recombination proteins [BR:pri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PRIO_0441
   MMR (mismatch excision repair)
    Other MMR factors
     PRIO_0441
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 YdjO
Other DBs
NCBI-ProteinID: CQR51694
UniProt: A0A0E4H7H4
Position
I:complement(486519..488846)
AA seq 775 aa
MNKLLFHNIPLGATGERIPQAKVASARTSREMVKPGDSDAAYFRRLEEGGILLNSPQIAA
VRHHQGPLLTLAGAGSGKTSVLICRTGYLLSVRGISPSQLLLLTFSNKAAAEMRERIALL
PGVRESDAARLQARTFHSFFLYFLRRQGLQQEIFNETRRQHILLKQIMRELGLPKDAYPP
ETLLALLSTCKMNLGEPEKLPETSPAEKEMKAVLLLYEQWKTDNFKIDFDDVLLIAYRML
REKPALLLELQMRFLYVMVDEFQDTNALQYELVKMIAHPQHNLMVVGDDDQTIYSFNGAR
SEFILEFEKLYPGARVITLDINYRSGPAIVGLGNGIIRHNMRRRAKTLQAAQGSGRQPRY
LRPQTADEEAEQIVEHILSEVASGARAYSDFALLYRASSSNRALLERLLLRDVPYVDYGE
GQLLYEHWLISPVLDYLRLSLNRRNFAAMENILPTLYLNREKGMNHIRRMEAVQPKQGPL
IHLLSLPGMEDFKSGKLRERLELIRGLIRLTPVQAIRQIRSGFYDYFIEANERHQATLHR
EMLKEMLDELEASAERFDSLPGFLEFIGNVTERNELSRQPGLKEQGNRVALMTIHKSKGL
EFPVVFLIGASEGILPHSSALEGERLKDRKTSPPPGARDSKVIAGNTAGLAALEEERRLA
YVAVTRAREELFISSPARHRGKKAEVSRFMLSAFRSAVPAAPASATVNRIPAAVRHISAS
SSRGKTHTVPIWKCTGGSCPGWTRMKAGGAEDHLSSKPCPLCSSPMEKSMREVPV
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgaacaagcttttatttcacaatataccgctcggggctaccggcgaacgcattccgcag
gcgaaggtcgcttctgcccggacaagccgcgaaatggtgaagcccggagactccgatgcg
gcttacttccgcaggctggaggaaggcggtattctgctcaactccccgcagatcgcggcg
gtgcggcatcatcaaggcccattgctgacactggccggggcaggctccggcaaaacctcg
gtactgatctgcagaaccgggtatttgctgtccgtccggggcatctccccaagccagctg
ctgctgctgacgttctccaacaaagcggcggcggagatgcgtgaacggattgccctgctg
ccaggcgtccgcgagagcgatgccgcgcgcctacaggcgcgcacgttccattcttttttt
ctctatttcctgcgccgtcagggtcttcagcaggaaatcttcaatgagacgcgccgccag
cacattctgctgaagcaaattatgcgcgagctgggtctgcctaaggatgcctatccgccg
gaaaccctgcttgctctgctctccacctgcaagatgaatctgggcgagccggagaagctg
ccggaaacctcacccgccgagaaggaaatgaaggcggtcctgctgctgtatgagcaatgg
aagaccgacaatttcaaaatcgacttcgacgatgtgctgctgattgcctaccgcatgctg
cgggagaaacctgcacttttgctggagctgcagatgagatttctgtacgtgatggtcgat
gagtttcaggataccaatgcattgcagtatgagcttgtcaaaatgatcgcccacccgcag
cataatctgatggtggtcggggatgatgatcagacgatctattccttcaacggagcccgc
agcgagttcattctggagttcgagaagctgtatccgggtgcacgggtcatcacgctggat
atcaattaccgttccggccccgcaattgtcggcctcggcaatggcattatccgccacaat
atgcggaggcgggccaaaacgctgcaagcggcccaaggcagcggccgccagccccggtac
ctgcgcccgcagacggcggacgaggaagccgaacaaattgtggagcatatcttgagcgag
gtagccagcggggctagagcatacagtgatttcgccctgctctaccgtgcttccagcagc
aaccgggccctgctggagcggctgctcctccgcgatgtcccctacgtcgattacggagaa
ggccaactgctctacgagcattggctgatctctccggtattggattatctgcgtttgtcg
ctgaaccggcggaacttcgcggcaatggagaatatcctgccgaccctatatctgaaccgg
gaaaagggcatgaaccacatccgccggatggaggccgtccagcccaagcagggcccgctg
atccacctgctgtctctgccgggaatggaggacttcaaaagcgggaaattgcgtgaacgg
ctggagctgatccggggtctgatccggctgacaccggtgcaggcgatccgccagatccgc
tcaggcttctatgactatttcatcgaagccaatgaacggcatcaggccactctccaccgg
gaaatgctgaaagaaatgcttgatgagctggaagcctcggcggaacggttcgacagcctc
ccggggtttctggagttcatcggtaatgtgaccgaacgcaacgagctaagccgccagccg
ggactaaaagaacaggggaaccgggttgccctgatgacaattcataagtcgaaggggctg
gagttcccggttgtttttctgatcggtgcgtcagaaggcatccttccccacagttccgca
ctggaaggtgagcggttaaaggacaggaagacatccccaccaccaggcgcgcgggacagc
aaagtcattgcaggcaataccgctggcctcgctgcacttgaagaggagcggaggctggct
tatgtggccgtgaccagggcccgcgaagagctgttcatcagctccccggcacggcaccgg
ggcaaaaaagcagaagtctccagatttatgctgtccgccttccgttctgcggtgccagcg
gctccggcttctgcaactgttaacagaatcccggcggcagtgcggcacatttccgccagt
tcctccagggggaaaacacacactgttcccatctggaagtgcaccggcggcagctgtccg
ggctggacgcgcatgaaggcagggggagccgaggatcacctgtcctccaagccctgcccg
ctctgcagctctccgatggagaagagcatgcgggaggtccccgtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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