KEGG   Paenibacillus riograndensis: PRIO_5316
Entry
PRIO_5316         CDS       T03849                                 
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
pri  Paenibacillus riograndensis
Pathway
pri03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PRIO_5316 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pri03400]
    PRIO_5316 (ruvB)
Enzymes [BR:pri01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PRIO_5316 (ruvB)
DNA repair and recombination proteins [BR:pri03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PRIO_5316 (ruvB)
    RecFOR pathway proteins
     PRIO_5316 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase AAA_16 TIP49 nSTAND3 AAA_22 AAA_14 NB-ARC RNA_helicase NTPase_1 AAA_18 TsaE AAA_24 AAA_3 Rad17 Sigma54_activat Resolvase Bac_DnaA Sigma54_activ_2 AAA_2 DUF815 AAA_17 AAA_28 AAA_25 Torsin NACHT ABC_tran AAA_19 IstB_IS21 ATPase_2 AAA_33 bpMoxR RsgA_GTPase Parvo_NS1 Viral_helicase1
Other DBs
NCBI-ProteinID: CQR57715
UniProt: A0A0E4HCT7
Position
I:complement(6183987..6184994)
AA seq 335 aa
MDDRIISANLMMDEQAVELSLRPRYLGEYIGQNQVKENLKIYIEAAKMRSEALDHVLLYG
PPGLGKTTLANIIANELGVNLRTTSGPAIERPGDLAALLTNLQQGDVLFIDEIHRLHRTV
EEVMYPAMEDFALDIMIGKGPSARSVRLDLPPFTLIGATTRAGLLSAPLRDRFGVVSRLE
YYTIDELSFIVSRNAELLGIEILGDAAEEIALRSRGTPRIANRLLKRVRDFAQVRGDGII
TPEIAGESLKMLQVDPRGLDSIDHKMLHSMISSFRGGPVGLDTIAATIGEESQTIEDVYE
PYLLQIGFLQRTPRGRVVTPAAYQHLGLPLPPQPQ
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggatgaccggattatatcggcaaacctgatgatggacgagcaggctgtagaattaagc
ctgcgcccccgctatctgggagagtatatcggacagaaccaggtcaaagagaatctgaaa
atatatatagaagctgccaaaatgcgcagtgaagcgctggaccatgtgctgctgtacggg
cctcccggtctcggcaaaacgacactcgcgaatattatcgccaatgagcttggtgtgaac
ctcaggacaacatccgggcctgccattgagcggcccggcgatctggccgcgctgctgacc
aatctccagcagggcgatgtgctgttcattgacgagattcaccggctgcaccggacggtg
gaagaggtgatgtatccggcgatggaggatttcgcgctggatattatgatcggcaagggg
ccgagcgcccgctcggtgcgcctggacctgccgccctttacgctaatcggcgccactacc
cgagccgggctgttgtctgcgccgctgcgcgaccgcttcggagtggtcagccggctggag
tattatacgatcgacgagctgagcttcatcgtgtcccgcaatgccgaactgctcggcatt
gagattctgggcgatgctgccgaagagatcgccctgcggtcccgggggactccgcggatt
gccaaccgcctgctgaagcgggttcgcgatttcgcacaggtgcgcggcgacggaatcatt
acgccggagattgccggagaatcgctgaagatgctgcaggtggacccgcgcgggctggac
agcatcgaccacaagatgcttcattccatgatcagttccttccgcggcggacctgtcgga
ctggataccatagctgcgacaatcggagaagagagccagaccattgaggatgtatatgag
ccttatttgctgcagattggatttctgcagcggacgccccgggggagagttgtgactcct
gccgcttatcagcatctgggccttccgcttcctccgcagccgcaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (39)   
   Pfam (39)   
All databases (49)   

Download RDF
DBGET integrated database retrieval system