KEGG   Cutibacterium modestum: BCB70_11095
Entry
BCB70_11095       CDS       T04515                                 
Name
(GenBank) RNase J family beta-CASP ribonuclease
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
prl  Cutibacterium modestum
Pathway
prl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:prl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BCB70_11095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prl03019]
    BCB70_11095
Messenger RNA biogenesis [BR:prl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BCB70_11095
SSDB
Motif
Pfam: RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Lactamase_B_6
Other DBs
NCBI-ProteinID: AOH46358
Position
2352723..2354414
AA seq 563 aa
MAEIGLTTPPDLQPDALRIIPLGGLGDVGRNMSCYEINGEMLLIDCGVLFPEDDHPGVDL
LLPGLDYLDEETLSKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLRE
HRIKGYKLNVVHEGDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGILINTGDFKMDQL
PLDGRITDLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKANKKLIVA
CFASHVHRVQQVLNMAVHHNRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDVDHYR
DNEVVIISTGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLT
KLGATVVHKGNALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLARATGVD
EKNIVLVEDGGVIDLVDGVPRVVGKIDASYILVDGSGVGELTEDTLTDRRILGEEGFLSV
VTAVDTRSATVVSRPAIQARGVAENDSVFAEITDQIVTELENAMKGGMDDTHRLQQVVRR
TIGRWVSRSLRRRPMIVPVVVKI
NT seq 1692 nt   +upstreamnt  +downstreamnt
gtggcagagattggattgacgacacccccggaccttcaaccggacgctttgcgcatcatc
cccctcggaggtttaggggatgtggggcgcaacatgtcgtgctacgagatcaatggggag
atgctcctcattgactgcggggtgctgttcccggaggacgaccacccgggggtcgacttg
ctgcttcctgggctggattacctcgatgaggagacgctatccaaggtgaaggcgctggtg
ctcacccatggccacgaggaccacattggcgcggtgccgtacctgcttaagcgtcgcccc
gatatcccgatctacggatccaagttgaccttggcgctggtcgaggcgaaattgcgtgag
caccgcatcaagggttacaagctcaatgttgtccacgagggtgacgtcgccgaggttggc
gagcagttcgacctggaattcattgccgtcaaccactccatccctgacgccctggcagtg
tgtgtgcgcaccgatgccggaattctcatcaacaccggcgacttcaagatggaccagctg
ccgctggatgggcgtattaccgacctgcgtgccttcgcgcgactcggcgaggaaggggtc
gatcttttcatggtcgactcgacgaatgctgaggttcccgggttcgtgaagtccgagacc
gagatcgagccggccatcgagagggtgttcgagaaggcaaataagaagcttattgtcgcc
tgctttgcctcccacgtgcatcgcgtccagcaagtgctcaatatggccgtccaccataac
cgcaaggtttgttacgtcggtcgttccatggtccgcaacatggctgtcgctcaggatctc
ggctacctcgatgttccagagaacaccgtcattgagttgcgcgacgtcgatcattaccgg
gataacgaggtcgtcatcatctccaccgggtcccagggagagccgctgtcggccctagca
aggatcgccaaccgggagcaccgggacatcgaggtgggcgagggagacaccgtcctgctg
gcatcctctcttatcccaggcaacgagaatgccgtctaccgcgtgatcaacggtctgacg
aagctcggtgccactgtggtgcataaaggcaacgcattggttcacgtctcgggccatgcg
gcggctggagagctgctgtacgcctacaacatcgtgcgcccgcgtgccgtgatgccgatt
cacggcgaggtgcgtcacctcgttgccaatgccgacctggccagggctaccggtgtcgac
gagaagaacattgtgctcgtcgaagacggcggggttattgatcttgtcgatggtgtaccg
cgcgtggttggcaagatcgacgcgtcgtacatccttgtcgacggctccggggtgggggaa
ctcaccgaggacactctcactgatcgccgtatcctcggggaagagggcttcttgtcagtc
gttaccgcggtcgatacccgctcagccaccgtggtgtcccgtccggcgattcaggctcgc
ggtgtcgccgagaacgattcagtcttcgcggagatcaccgaccagatcgtcaccgagcta
gagaacgccatgaagggcggtatggacgacacccaccggttacagcaggtggtgcgtcgg
accataggtcggtgggtgtcacggtcgttgcgacggcggcctatgatcgtgccggtcgtc
gtcaagatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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