KEGG   Polaribacter reichenbachii: BW723_13280
Entry
BW723_13280       CDS       T04692                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
prn  Polaribacter reichenbachii
Pathway
prn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:prn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BW723_13280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prn03019]
    BW723_13280
   03009 Ribosome biogenesis [BR:prn03009]
    BW723_13280
Enzymes [BR:prn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BW723_13280
Messenger RNA biogenesis [BR:prn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BW723_13280
Ribosome biogenesis [BR:prn03009]
 Prokaryotic type
  rRNA helicases
   BW723_13280
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_19 Helicase_RecD
Other DBs
NCBI-ProteinID: APZ47196
UniProt: A0A1B8U1F4
Position
3117657..3118997
AA seq 446 aa
MSKTFSDLGIHQQIQQSLTDLKISVPTDIQEKVIPVILNKKDDVVALAKTGTGKTAAFGL
PLLQLIDTENANIQAVILAPTRELGQQIHSNLESFASNIPEISIAVVCGGIPIKPQIERL
KKTTHIVVATPGRLADLVKREAINIKNIYYFILDEADEMVSALKEGLDAIITEIPKKRRT
LLFTATMPGAIRQMVNNYMAKNVVQIEADMKTIGHQGIEHQYVVVEPIEKLEVLLHFLNS
KEGKRGIIFCKTKAAVNKLAKNLAINKFSSGAIHGSLTQGIRDRIMGQFREGHIDILIAT
DLAARGIDVKEVEYVVNYHLPDTYDAYVHRSGRTARAGAKGLSLTVLQQEEVVDIADFEK
ELGISFSRYEKADAQSIEENNGLIWAKKIFKTKPNKTVSEDFKRKVSTVFHHLTKEELVE
KVLADYLARTTTKVSKEENSKKKKRK
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgtcaaaaacgttttctgatttaggaattcatcaacaaatacaacaaagcctaactgat
ttaaaaatttctgtacctacagatattcaagaaaaagtaattcctgtaattttaaataaa
aaagacgatgttgttgctttagcaaaaacaggaacaggtaaaacagctgcttttggtttg
cctttattacaattgattgatacagagaacgctaatatacaagcagtaattttagcgcca
actagagaattagggcaacaaattcatagcaatttagaatcttttgcatctaatattcca
gaaatatcaattgcagttgtttgtggaggaatacctataaaacctcaaattgaaagatta
aaaaaaacaactcatattgtagttgctactcctggaaggttggcagacttggtaaagcgt
gaagcgatcaacattaaaaatatttattattttattttagatgaagctgatgaaatggtt
agcgctttaaaagaaggattagatgcaattataactgaaatacctaaaaaaagaagaacg
ctattatttactgctacaatgccaggtgcaattaggcaaatggttaataattatatggct
aaaaatgttgttcagattgaagctgatatgaaaactattggacatcagggaattgaacat
caatatgtagttgtagaaccaattgaaaaattagaagttttattgcattttttaaattct
aaagaaggaaaaaggggaattattttttgtaaaactaaggctgccgttaataaattagct
aaaaatttagcgattaataaattttcatctggtgcaattcacggaagtttaacccaggga
attcgtgacagaattatggggcaatttcgagaaggacatatagatattttaatagctaca
gatttagcagcaagaggaattgatgttaaagaagttgagtatgtggtaaattatcatttg
ccagatacttatgatgcttatgtacatagaagtggaagaactgcaagagcaggagcaaag
gggctatctttaacggttttacaacaagaagaagtggttgatattgccgattttgaaaaa
gaattaggaatttcattttcgagatatgaaaaagcagatgcacaaagtatagaagaaaac
aatggactaatttgggcaaagaaaatatttaaaacaaaaccaaataaaacggtttcagaa
gattttaaacgaaaagttagtactgtttttcatcatttaaccaaagaagaattagtagaa
aaagtgttggcagattatttagctagaactacaactaaagtttctaaagaggaaaattct
aaaaagaaaaagagaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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