KEGG   Xylanibacter ruminicola: PRU_0331
Entry
PRU_0331          CDS       T01212                                 
Name
(GenBank) RNA polymerase sigma-70 factor family protein
  KO
K03086  RNA polymerase primary sigma factor
Organism
pru  Xylanibacter ruminicola
Pathway
pru02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pru00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    PRU_0331
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pru03021]
    PRU_0331
Transcription machinery [BR:pru03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PRU_0331
SSDB
Motif
Pfam: Sigma70_r1_2 Sigma70_r2 HTH_36 HTH_47 Bot1p
Other DBs
NCBI-ProteinID: ADE81937
UniProt: D5EWU6
Position
complement(400710..401432)
AA seq 240 aa
MHHLLENHAEGFNVYLEQIENNQPLTMEEEQELGRRIMAGDTTARNKLIEANLRFVLTCA
IDMATPFVPIEELIAAGNYGLTIAAARYNPSFDNHFCSYAVHHIRRAISEAIRTWTCSVK
TPNLLLGLQACLSLDDCHDTDDDNWSRDLIDRIPAAPLSSEMLRDFEETKEGLRSFLSKW
YYPSDVNLMMDLAQMVYDGYSVSDLAKKYGLPIRRMKAIIADLREKAILHQLQKAYAKAA
NT seq 723 nt   +upstreamnt  +downstreamnt
atgcatcacctccttgagaatcatgccgaaggtttcaacgtctaccttgagcaaatcgag
aacaatcagcctctcactatggaagaagagcaggaactgggccgccgcatcatggcaggc
gacaccactgctcgcaacaagctcatcgaagccaacctgcgctttgtactcacctgcgcc
atcgacatggccactcccttcgtacccatcgaggaactcatcgcagctggcaactacggt
ctgaccatagcagctgcacgctacaacccttcattcgataatcacttctgctcatatgcg
gtacaccacatccgcagagccatcagcgaggccatcaggacctggacatgttccgtcaag
acccccaatctccttctggggcttcaggcctgtctgtcgcttgacgactgtcacgataca
gatgatgacaactggagccgcgaccttatagaccgcatacccgctgcaccattgagcagt
gaaatgcttcgcgactttgaggaaaccaaggaggggctgcgctctttcctaagtaagtgg
tactatcccagcgatgtaaacctgatgatggacttggcacagatggtgtatgacgggtat
tccgtttccgaccttgccaagaagtacgggctgcccatcaggagaatgaaggccatcatt
gccgaccttcgcgagaaggctattctgcaccaactgcagaaggcctacgcaaaggcggcg
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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