KEGG   Xylanibacter ruminicola: PRU_0496
Entry
PRU_0496          CDS       T01212                                 
Name
(GenBank) putative pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
pru  Xylanibacter ruminicola
Pathway
pru00040  Pentose and glucuronate interconversions
pru01100  Metabolic pathways
pru02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pru00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    PRU_0496
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PRU_0496
Enzymes [BR:pru01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     PRU_0496
SSDB
Motif
Pfam: Pectate_lyase_4 GRP
Other DBs
NCBI-ProteinID: ADE83376
UniProt: D5EXN7
Position
590843..592114
AA seq 423 aa
MRNKLLMMLICCMAANVLIACSSASGNVSDSTIDEPTENEEQNQQDLPFGFCALSSRTDA
TQTYHITGGGYYSYPVPESATGVVVLTSDGRDMKAAIESAIKNSKNKVIIFDGSNGDFIV
SSTIKVTVSGKTLLGINNARLCTQWALTDEMKKALNDAGVLSMSTSDGGGVLVNGTEVKE
QAEYNTRKILIEMTGDKSENYRQAGIFTLNNCQNIIVRNLKFVGPGAVDVGGTDLLSCTG
TKNCWVDHCEFTDGLDDNFDITKSSDFHTVSWCTFSYTNRSYMHQNSNLIGSNDNEATGF
LNTTFAFNWWGVGCQGRMPMARVGKIHMLNNYFSSTTAYNGINPRKNSEFLIEGNYFDKG
VAKYYSQNDAVAVTWAADNYIAEATSIPSSVGATVSVPYQYSAVPASQVPTLVKQGAGAT
LFR
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgagaaataaactattaatgatgctaatctgctgcatggcagcaaatgtattgattgcc
tgttcgtcggcttctggtaacgtttccgacagcaccatcgacgaacctactgagaatgaa
gaacagaaccaacaggacctgccctttggcttttgcgccctgtcttcacgtaccgacgct
acccaaacctatcatatcacgggcggcggctattattcctaccctgtaccagaaagtgct
acaggtgtggtagtattgacatctgatggtcgggacatgaaagctgctatcgaaagtgcc
atcaagaacagtaagaacaaagtgattatcttcgatggctcgaatggcgactttatcgtg
tcatctactatcaaagtaaccgtttcgggcaaaacactgcttggcatcaataatgcccgt
ctctgcacccagtgggctttgaccgatgaaatgaaaaaagccctgaacgatgctggtgtg
ctcagcatgagtaccagcgatgggggaggagtgttagtaaacggcactgaggtaaaagag
caggctgaatacaacacacgtaagatactgattgagatgacaggcgataaaagcgagaac
tatcgtcaggctggcatttttacccttaataactgccagaacatcattgtacgcaatctg
aaatttgttggccctggggctgttgatgttggcggcaccgaccttctttcatgcacaggc
actaagaattgttgggtagatcattgtgagtttaccgatggattagacgataactttgat
atcacgaagtcgtccgacttccatactgttagttggtgcaccttcagttataccaatcgt
tcgtatatgcaccagaactccaatctcattggtagcaacgacaacgaagcaacaggtttc
ctgaacaccactttcgccttcaactggtggggtgtgggttgtcaaggacgtatgcctatg
gcccgtgttggtaagattcacatgctgaataattattttagcagcaccacggcctacaat
ggcatcaatccacgtaagaactcagaattcctgatagagggtaactatttcgacaagggc
gttgccaaatattacagtcagaacgatgctgtggctgtaacctgggcggctgataactat
atagccgaagcaaccagcatcccatcctctgttggcgccactgtttcggtgccttatcag
tattcggcagtgcccgccagtcaagttcccacattggtcaaacagggtgccggcgccact
ctctttcggtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

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