KEGG T00541: PsycPRwf

Psychrobacter sp. PRwf-1: PsycPRwf_0156

Entry

PsycPRwf_0156     CDS       T00541

Name

(GenBank) NusA antitermination factor

K02600

transcription termination/antitermination protein NusA

Organism

prw Psychrobacter sp. PRwf-1

Brite

KEGG Orthology (KO) [BR:prw00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prw03021]
    PsycPRwf_0156
   03009 Ribosome biogenesis [BR:prw03009]
    PsycPRwf_0156
Transcription machinery [BR:prw03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     PsycPRwf_0156
Ribosome biogenesis [BR:prw03009]
Prokaryotic type
  rRNA transcription factors
   PsycPRwf_0156

SSDB

Motif

Pfam:

NusA_N KH_5 HHH_5 S1 KH_2

Other DBs

NCBI-ProteinID:

ABQ93115

UniProt:

A5WBS4

Position

184592..186079

AA seq 495 aa
MSREILTVVETVSNEKGLNPEDIFEAIEEALVVSTKKRVYTEQPEVAVRVEIDRDTGDYD
TYRYWTVVADEDHEMPACQLAISDLDENEWSIGDIKEEQIESIEFGRIAATQAKQVIIQK
IREAERALTADAFEPRIGEMMYGEVKKQTRDGYIIDLGDNAEGYLSRDQMLPREQLRVKS
RINAILYHVNRDNRGAQLLLSRTSPDMLVALMNKEVPEINEQIIEIRDVARQPGVRAKIS
VKTNDHRIDPVGACIGMRGTRIQAVQSELDGERIDVIVWSDDPAQYIISALEPADVSSII
LDEDAKTADIIFTANDQLARAIGAQGQNVRLASELTGYKLNMMLEAEYLERQQNETKAYL
ELFYNRLEVDEDLAQALVDVGFTSIEEVAYVPVETFYDIEGLDDDAIEMIQERAKEVVIA
DELVKQQNMKEPSKELLTMDGMTTDWAYKLAQRDIITLDDLAEQAVFDLEDIEGLDEKTA
GELIMKARESWFNEE

NT seq 1488 nt +upstreamnt +downstreamnt
atgagtcgagaaattttaacggtagtagaaaccgtcagtaacgagaaaggcctaaatcca
gaagacatctttgaggcaattgaagaggctttggtggtttctaccaaaaaaagagtttat
accgagcagccagaagtggcagtaagggttgaaattgaccgtgataccggtgattatgat
acctatcgctattggactgtggttgccgacgaagaccacgaaatgccagcatgtcagtta
gccatcagtgatttagatgaaaacgaatggtctattggcgacattaaagaagagcaaatc
gaatctatcgaatttggacgtattgccgccactcaggccaagcaagtgattatccaaaaa
attcgtgaagcagagcgtgcattaactgccgatgccttcgagccaagaattggtgagatg
atgtatggtgaagttaaaaaacaaacgcgtgatggctatattattgatttaggggataat
gctgaaggctatttatctcgtgatcaaatgctgcctcgtgaacaattacgtgtaaagtct
cgtattaatgctatcctataccatgtgaaccgtgacaaccgcggcgcacagttattgtta
tcgcgcaccagcccagatatgttggtggcgttaatgaacaaagaagtgcctgagattaac
gaacaaatcattgaaatccgtgatgtggctcgtcagcctggggttcgtgctaaaatttca
gtaaaaaccaatgaccatcgtattgatcctgtgggcgcgtgtattggtatgcgtggtacc
cgtatccaagcggtacaatctgagcttgatggcgagcgtattgatgtgatcgtgtggtct
gatgaccccgcgcaatatatcatcagtgcacttgagcctgcagatgttagcagtattatt
ttagatgaagatgccaagaccgcagacatcatctttaccgccaacgatcagttagcgcgc
gccattggtgcccaaggccagaacgtacgtttggcttctgagctaaccggttataagtta
aacatgatgcttgaggcggaataccttgaacgtcaacaaaacgaaacaaaagcctatctt
gagctgttctacaatcgtctagaagtagatgaagacttagctcaagcgctagtagatgta
ggctttaccagtattgaagaagtggcttatgtgcctgtcgaaaccttctatgacatcgaa
ggtcttgacgacgacgcaattgaaatgattcaagagcgtgcaaaagaagtagtcattgct
gatgaactggttaaacagcaaaatatgaaagagccaagcaaagagttgctcacaatggac
ggcatgacgaccgactgggcgtacaagctggctcaacgtgacatcatcacgttagatgat
ttagcagaacaggcagtatttgatcttgaagacattgaaggtcttgatgaaaaaactgct
ggtgagttgatcatgaaagcacgtgaatcttggtttaatgaagaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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