KEGG   Piscirickettsia salmonis: PSLF89_1899
Entry
PSLF89_1899       CDS       T03982                                 
Name
(GenBank) tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein
  KO
K15461  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
Organism
psal  Piscirickettsia salmonis
Brite
KEGG Orthology (KO) [BR:psal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psal03016]
    PSLF89_1899
Enzymes [BR:psal01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     PSLF89_1899
Transfer RNA biogenesis [BR:psal03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    PSLF89_1899
SSDB
Motif
Pfam: DAO NAD_binding_8 FAD_binding_2 FAD_binding_3 3HCDH_N GIDA Pyr_redox_2 FAD_oxidored HI0933_like AlaDh_PNT_C TrkA_N Thi4 NAD_binding_9 UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: AKP73704
Position
1348202..1349479
AA seq 425 aa
MTMLVEGNYAPWNRLAASATSPNVIVVGAGIAGASTSWALSTQGFNVTLVEKAAEAAQEA
SGNLAGLMMPALATDQSSFAEYFIQAYLYSIQHAKTLAQSHQFNFSQTGIIQLAFNDRQQ
KRQKNWLELKHVADLLEWVSQEQVMALSGLDFSCSGVYFKEAAWLSPYLYVKSHIHACKA
SINCLFNSYVNQLHYEQGLWKLYDQHQQLIAEAPTLILANASDATRLLGQFSSVLPLSLR
TVRGQVSALKNHARVSQLKLPVCYDGYITPVINGKNYLGATFIDDYQAKCLHQDRVQNIQ
QLKQVLPGLNIDEREYKDLSQDRAALRCITTDYLPVIGPVPDVAFYRQHYSRLIQDRRES
RYPSAQYLPGLFMNIGHGSRGMVSAPFATKLLVSELMGKDLKLSKRLREHLHPGRFLIRQ
LKKGK
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgactatgctagtagaaggtaattatgcaccatggaatagacttgcagcatcggcgact
tcgcctaacgtgattgtcgtgggtgcagggattgcaggagcgagtacaagttgggcctta
agtacacaaggttttaacgttactttggttgaaaaagcagcagaagccgctcaggaagcc
tctggtaatttggccggcttaatgatgcctgcgttagcaacagaccaaagctcgtttgct
gagtattttattcaagcctacctttacagtattcagcatgcaaaaacgctggcacagtct
catcagtttaacttttcacaaacaggcattattcagctggcctttaatgaccgtcagcaa
aagcgtcaaaaaaactggttagagcttaagcatgttgcagatttgttggagtgggtgagt
caagagcaggtgatggcgctttctggattagatttttcttgttctggtgtttatttcaag
gaagcggcctggttatccccctatttatatgtaaagtcgcatattcatgcctgcaaggca
tcgattaattgcttatttaacagttatgtcaaccagttgcattatgaacagggactatgg
aaattgtatgatcagcatcagcaattaatcgctgaggccccaacgttaatacttgccaat
gcgagtgatgctacacggttgcttggtcagttttccagtgtcttacccttatcattgcgg
acagtacgtgggcaggtatctgctttgaaaaatcatgcaagggtttcgcagttaaagtta
cctgtatgttatgatggttatattacgcctgtcattaatggtaaaaattatttaggtgca
acctttattgatgattatcaggcaaaatgccttcaccaagaccgtgtgcagaatattcag
caactcaagcaggtgttgccagggcttaatatcgacgaacgtgaatataaggatctttct
caagatcgagcggctttgcgttgtattacaactgattatttgccagtgattggcccggtg
ccggatgttgcattttatcggcagcattactctcggcttattcaagaccggcgtgaatca
cgttatccaagtgcccaatatttgccagggttatttatgaatataggtcatggctcacga
gggatggtttcagcgccttttgccactaagttgcttgtgagtgaactgatgggtaaagat
ctgaagttgtcaaagcgcttgcgcgagcacttgcaccctgggcggtttttaattcggcag
cttaaaaaaggtaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (36)   

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