KEGG   Pseudomonas syringae pv. syringae B728a: Psyr_0182
Entry
Psyr_0182         CDS       T00246                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
psb  Pseudomonas syringae pv. syringae B728a
Pathway
psb00300  Lysine biosynthesis
psb00470  D-Amino acid metabolism
psb01100  Metabolic pathways
psb01110  Biosynthesis of secondary metabolites
psb01120  Microbial metabolism in diverse environments
psb01230  Biosynthesis of amino acids
Module
psb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Psyr_0182
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Psyr_0182
Enzymes [BR:psb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Psyr_0182
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AAY35255
UniProt: Q500B7
Position
195060..196307
AA seq 415 aa
MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQEVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED
VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLALVDRLGDCGIHLHHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRDSEPRAYDIVGPICETGDFLAKGRELALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgccttcaactaccgcgacggtgagctgttcgcggaaggggtagcattgtctgcc
attgccgagcgcttcggcacgccgacctatgtctactcgcgcgctcacatcgaagcgcaa
taccgtgcctacgccgacgcgctgagcggcatgccgcatatggtctgcttcgccgtaaaa
gccaactccaacctgggcgtgctcaatgtcctggcgcgccttggcgccggtttcgacatc
gtctcgcgtggcgagctggagcgtgtgctggcggcgggtggcaaagccgaaaagatcgtg
ttttccggtgtcggcaagacccgcgaagacatgcggcgcgcccttgaagtcggcgtgcac
tgctttaacgtcgaatccaccgacgagctggagcgcctgcaggaagtggctgccgaactc
aacgttcgggcgccgatatcgctgcgggtcaatccggatgtggatgcaggcactcacccc
tacatctccaccggcctcaaggaaaacaagttcggtatcgccattgcagcagcggaagac
gtttacattcgcgcctcgcaactgccgaacctggaagtgatcggggtcgactgccatatc
ggctcgcaactgaccacgctcgaaccgttcatcgatgcgctggatcgcctgctggccctg
gtcgatcgtctgggcgattgcggcattcatctgcatcacatcgatctgggtggcggtctt
ggcgtgcgttatcgcgacgaagagcctccgctggcggccgactacatcaaggccgtgcgc
gagcgtctggccggtcgcgacctggggctgctgttcgagccgggacgcttcatcgtcgcc
aacgcaggcgcgttgctgacccgtgtcgaatacctcaagcataccgagcacaaggatttt
gccatcgtcgatgcggcgatgaacgatctgatccggcctgcgctgtatcaggcctggatg
gatgtcacggcggtgcgtccgcgtgacagcgaacctcgtgcgtacgatatcgtcgggccg
atctgcgagaccggcgacttcctcgccaaggggcgcgagctggcgctggccgagggcgat
ctgctggccgttcattcagccggtgcctatggcttcgtcatgagctcgaactacaacacc
cgtggccgtgccgccgaggtactggtcgacggttcccaggcttttgaagtgcgtcgtcgc
gaaaccgtggccgagctgttcgctggcgaaagcctgctgccggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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