KEGG   Pseudomonas syringae pv. syringae B728a: Psyr_2896
Entry
Psyr_2896         CDS       T00246                                 
Name
(GenBank) Excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
psb  Pseudomonas syringae pv. syringae B728a
Pathway
psb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Psyr_2896
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psb03400]
    Psyr_2896
DNA repair and recombination proteins [BR:psb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Psyr_2896
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 HHH UVR HHH_2 GIY_YIG_2 GIY_YIG_domain 5_3_exonuc
Other DBs
NCBI-ProteinID: AAY37930
UniProt: Q52377
Position
complement(3474485..3476308)
AA seq 607 aa
MTQTFDPGAFLATCSGRPGVYRMFDAEATLLYVGKAKNLKKRLASYFRKTGHAPKTGALV
SRIAQIETTITGNETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDNAFPRLSIHRG
TKKAKGRYFGPYPSAGAIRESLSLLQKTFQVRQCEDSYFKNRTRPCLQYQIKRCKGPCVG
LVEPEVYAEDVRHSVMFLEGRSNALSDELNASMEKAAMALDFERAAELRDQVALLRRVQD
QQSMDGGTGDVDVVAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVGEVMSAFLA
QYFLGGIDRELPGEVIVNVINDDFPAFVDAVEELRGVEMVISHRVRGTRARWQQMAVTNA
EQALTARLANRQHVASRFEALAKVLGLEDPPMRLECYDISHSSGEATVASCVVFGPEGPI
KSDYRRFNIEGVTAGDDYAAMHQALTRRYSRIKAGEGKLPDVLLVDGGKGQMSMARDVLN
ELQVPELILLGVAKGTTRKAGFETLYLNDSAHEFTLPGDSPALHLIQQIRDEAHRFAITG
HRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISKKLAESI
YANLHSE
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgacccagacatttgatccaggtgcatttctcgcgacctgtagcggtcgccccggcgtc
taccgtatgttcgacgccgaagccacactgctttacgtcggcaaggccaagaacctcaag
aagcgtcttgccagctacttccgcaagaccggacacgcgcccaagaccggagcgctggtg
tcgcgtatcgcccagatcgaaaccaccatcacgggcaacgaaaccgaagcgctgttgctg
gagcagaccctcatcaaggagtggcggcccccgtacaacattctcctgcgtgacgataaa
tcctatccctatgtgtttctgtccgacaacgcctttccgcggctgagcattcatcgtggc
accaagaaggccaagggtcgctatttcgggccttacccgagtgcgggcgcgattcgcgag
agcctcagcctgctgcagaagactttccaggtacggcagtgcgaggacagctacttcaag
aaccgcacccgtccttgcctgcaatatcagatcaaacgctgcaaagggccgtgtgtcggg
ctggtcgagcctgaggtgtatgccgaggacgtacgtcactcggtaatgttcctcgaaggg
cgcagcaatgccttgagcgacgagctgaacgcgtcgatggaaaaagccgcgatggcgctc
gatttcgaacgcgcagccgagttgcgtgatcaggtggccttgttgcgccgcgtccaggat
cagcaaagcatggatggcggcaccggcgatgtcgatgtggtcgccgcgttcgtcaaccct
ggcggtgcctgcgtgcacttgatcagcgtgcggggcgggcgggtgctgggcagcaagaac
ttcttcccgcaggtgggcatagaagaggaggtcggcgaagtgatgtcggcattcctggct
cagtatttcctcggcggcatcgaccgtgagctgcccggcgaagtcatcgtcaatgtcatc
aacgacgatttccctgcgttcgtcgacgccgtcgaagagctgcgcggcgtcgagatggtc
atcagtcatcgcgtgcgcggcactcgggcgcgctggcagcaaatggcggtcaccaatgcc
gagcaggcgctgaccgcgcggctggccaaccgtcagcatgtggcgtcgcggttcgaagcg
ctggccaaggtgctgggtctcgaagacccgccaatgcgcctggaatgctacgacatcagc
cactccagcggtgaggcgaccgtagcgtcgtgcgtggtgttcggccccgaaggcccgatc
aagtccgattaccggcgtttcaatatcgaaggcgtgacggcgggcgacgactacgccgcc
atgcaccaggcgttgacccgacgttacagccgcatcaaggccggggagggcaagttgcct
gacgtgctgctggtggacggcggcaaggggcagatgtccatggcgcgcgacgtgctcaat
gaattacaggttcctgagctcatcctgctcggtgttgccaagggcaccacgcgcaaggcc
ggtttcgaaaccctgtacctgaacgactcagcacatgaattcacgctgcccggcgactct
ccggccctgcaccttatccagcagattcgcgacgaagcacaccgtttcgcaatcaccggc
caccgtgcccgtcggggcaagacccggcgcacatcgacccttgagggcgtggcgggtgtc
gggccgacccggcgtcgagacctgctcaaacatttcggcggattgcaggaattgtcccgt
gccagcatcgatgaaatagcaaaagcacccggaatcagcaaaaagctggcagagtcgatt
tatgcaaacctgcacagcgagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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