KEGG   Mollisia scopiformis: LY89DRAFT_616916
Entry
LY89DRAFT_616916  CDS       T04865                                 
Name
(RefSeq) RPB5 subunit of DNA-directed RNA polymerase
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
psco  Mollisia scopiformis
Pathway
psco03020  RNA polymerase
psco03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LY89DRAFT_616916
  09124 Replication and repair
   03420 Nucleotide excision repair
    LY89DRAFT_616916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psco03021]
    LY89DRAFT_616916
   03400 DNA repair and recombination proteins [BR:psco03400]
    LY89DRAFT_616916
Transcription machinery [BR:psco03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     LY89DRAFT_616916
  RNA polymerase III system
   RNA polymerase III
     LY89DRAFT_616916
  RNA polymerase I system
   RNA polymerase I
     LY89DRAFT_616916
DNA repair and recombination proteins [BR:psco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      LY89DRAFT_616916
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat Ring_hydroxyl_A
Other DBs
NCBI-GeneID: 28820506
NCBI-ProteinID: XP_018071499
JGI: 616916
UniProt: A0A194XAH5
Position
Unknown
AA seq 240 aa
MASTDEDRMRKQREAGERESAKLWRACRTVHEMVRDRGYQLSDAEVTMSFDAFKQKYTTD
DGSISRKMMNFSASPTLEMIKRYSNPVTAHDLHPSSPDIGTIWVEFLPDSNVGIKQMRAF
AQHLTANNFHTGILITGVNITPAALKIIPAVASETRIECFMEADLLVNITHHELVPQHVL
LSKEERTALLQRYRLKDTQLPRIQLGDPVARYLGLRRGQVVKIIRKSETAGRYASYRLCV
NT seq 723 nt   +upstreamnt  +downstreamnt
atggcttccaccgacgaggatcgcatgcgcaagcagcgcgaagctggcgaaagagaatct
gccaaactctggcgcgcatgtcgaaccgtccatgagatggttcgagatcgaggctaccaa
ctgtctgacgcggaagtcaccatgagctttgacgctttcaagcaaaagtacacgacggat
gatggcagcatcagtcgcaagatgatgaacttctccgccagtccaaccctcgagatgatc
aagcgctattccaatcctgtcaccgcacacgatctacatccttcgagccccgatattggc
accatctgggtcgagttcttgccagactccaatgttggtatcaagcaaatgcgcgccttc
gcccagcatcttactgctaacaacttccacaccggcatcctgatcaccggcgtcaacatc
acccctgctgcgctgaagattattcctgctgtggcttcggagacgagaattgagtgcttt
atggaggcggatctgttagtcaacatcacgcatcacgagctggtcccccaacatgttttg
ttgagcaaggaggagagaactgcgcttctgcaaagatacagattgaaggatacacagctg
ccaagaatccaattgggagacccagttgcacggtaccttgggttgagacgaggtcaagtg
gtcaagatcattcgaaagtctgaaacggcaggacgatatgctagttatagactttgcgtc
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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