KEGG   Pseudonocardia sp. AL041005-10: WY02_06405
Entry
WY02_06405        CDS       T04051                                 
Name
(GenBank) DNA glycosylase
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
psea  Pseudonocardia sp. AL041005-10
Pathway
psea03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:psea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    WY02_06405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psea03400]
    WY02_06405
Enzymes [BR:psea01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     WY02_06405
DNA repair and recombination proteins [BR:psea03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     WY02_06405
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS NFACT_N
Other DBs
NCBI-ProteinID: ALE78125
UniProt: A0A0M3U7Z4
Position
complement(1480883..1481719)
AA seq 278 aa
MPEGHTVHRLARLQRRRYAGRPVAVSSPQRRFTTGAEIVDGRVLVDVQAHGKHLFQHYGP
DTTVHVHLGLWGRFPNRRLPEEPPRGQVRMRMVGETHYADLRGPAACELLDDVGVKELRA
RLGEDPLRDDADPARVRERFARSRVPLAALLMDQSVIAGIGNVFRAETLFRTGLDPMTPA
RDLDDRSFALLWDDLTEMLRDGERRGRIETLRPEHDPALLAPPDRGAVCASVVYAYRRTG
QPCLVCGAPIAHAEVRTRNLFWCPGCQAGGSARPLTER
NT seq 837 nt   +upstreamnt  +downstreamnt
atgcccgagggacacaccgtgcaccggctcgcgcggctgcagcgccgccgctacgccgga
cggccggtggccgtctccagcccgcagcgccgcttcaccaccggcgccgagatcgtcgac
gggcgggtgctggtcgacgtgcaggcccacggcaagcacctgttccagcactacgggccg
gacaccaccgtgcacgtccacctcgggctgtggggccggttcccgaatcggaggctcccc
gaggagccgccccgcggacaggtcaggatgcggatggtcggcgagacgcactacgccgac
ctgcgcggcccggccgcctgcgagctgctcgacgacgtgggtgtgaaggaactgcgggcg
cgcctcggcgaggacccgttgcgcgacgacgcggacccggcgcgtgtccgggagcggttc
gcccgctcccgggtcccgctggccgccctgctcatggaccagtcggtgatcgcgggtatc
ggcaacgtcttccgcgccgagacgctgttccgtaccggactggacccgatgaccccggcc
cgcgacctcgacgaccggtccttcgccctgctctgggacgacctgaccgagatgctccgg
gacggcgagcggcgcggccggatcgagacgctgcgccccgagcacgacccggccctgctg
gcgccgcccgaccgcggcgcggtctgcgccagcgtcgtctacgcctaccgccgcaccgga
cagccctgcctggtctgcggcgccccgatcgcgcacgccgaggtccgcacgcggaacctg
ttctggtgtcccggttgccaggccggaggcagcgcccggccgctcaccgaacggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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