KEGG   Pseudomonas sp. CCOS 191: CCOS191_4564
Entry
CCOS191_4564      CDS       T03967                                 
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
psec  Pseudomonas sp. CCOS 191
Brite
KEGG Orthology (KO) [BR:psec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psec03400]
    CCOS191_4564 (phrB)
Enzymes [BR:psec01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     CCOS191_4564 (phrB)
DNA repair and recombination proteins [BR:psec03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    CCOS191_4564 (phrB)
 Prokaryotic type
    CCOS191_4564 (phrB)
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase
Other DBs
NCBI-ProteinID: CRI59100
UniProt: A0A0F7Y454
Position
I:5144932..5146368
AA seq 478 aa
MQLIWLRSDLRVDDNTALAAACQRGPTVALWVASPGQWLAHDDAPCKVDFWLRNLRLLRQ
SLAALNIPLLIRQVDTWADAPQCVLDVCRQHSIEAVHWNEEYGINETRRDEATRNLLQQA
GIGATAHLDQLLFRPGSVMTRGGQYFQVFSQFKRVCLEHLHRSLPSLLPPVLRQEALGIH
GDVIPEHIDGFEAPSDALRQHWPAGEDEARQRLQHFIDETVEDYAQLRDLPARAGTSQLS
PYLAAGVVSPRQCLHAALGSNRGEFDSGSVGVQTWVNELLWREFYKHTLVGYPRVSRHRA
FRPHTEALPWRNAPADLQAWEEGRTGFPIIDAAMRQLLDTGWMHNRLRMIVAMFLSKNLL
IDWRHGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVTQSQRFDPKGVFIR
RWLPELKDRDDKSIHYPVKSADLFATNNYSGPIVDLDSSRQRALEAFKSLSSWQDQGA
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgcaattgatatggctacgcagtgacctgcgtgtggacgataacaccgctctcgcggcc
gcctgccagcgcggcccgaccgtggccctgtgggtcgccagccctggccagtggctggct
catgacgacgcaccctgcaaagtcgacttctggctgcgcaacctgcggttgctgcgccag
tcactcgcggcgctgaatattccgctattgattcgccaagtcgatacgtgggcagacgcc
ccgcaatgcgtgctcgatgtctgccgccagcacagcatcgaggccgtgcactggaacgag
gaatacggcatcaacgagacccggcgcgacgaagcgactcggaacctgctgcaacaggca
ggaatcggcgctaccgcccacctcgaccagttgctgttcaggcccggtagcgtaatgacc
cgcggtggccagtatttccaggtcttcagccagttcaaacgggtctgcctggaacatctg
caccgcagcctcccctctctccttccacctgtacttcgccaagaggcgctgggtattcac
ggcgacgtcatacccgagcatatcgacggcttcgaggcaccttccgacgcactgcgccag
cactggcccgccggtgaggatgaagcacggcagcggttgcaacacttcatcgacgaaacc
gtcgaggactacgcgcaactgcgcgacctgcccgcccgggccggtaccagccagctttcg
ccttacctggctgcgggtgtggtctcgccacgtcagtgcctgcacgcggcccttgggagc
aaccggggtgaattcgacagtggcagcgtcggcgtgcagacctgggtcaacgagctgctg
tggcgcgagttctacaaacacacgctggtgggctatccccgggtctcgcggcatcgcgcc
ttccgtccgcacaccgaggcgctaccctggcgcaatgcgcctgccgacctgcaggcctgg
gaggaaggccgcaccggcttccctatcatcgatgccgccatgcgtcagttgctggacacc
ggctggatgcacaaccggttgcgcatgatcgtcgccatgtttctcagcaagaacctgctg
atcgactggcggcatggcgagcggcatttcatgcgccacctgatagacggcgatctggcc
gccaacaacggcggctggcagtggagtgcctctacaggcactgacgcagtgccctatttc
cgcattttcaatcctgttacccagtcacagcgcttcgacccgaagggtgtgttcattcgt
cgatggctgccggaattgaaggacagggacgataaatcgattcactacccggtgaaatct
gccgatctatttgctactaataattactcgggcccgatagtcgatctcgatagcagtcgc
caacgcgcattggaagccttcaaaagcttgtccagctggcaggatcagggggcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system