KEGG   Pseudonocardia sp. EC080625-04: FRP1_22275
Entry
FRP1_22275        CDS       T04054                                 
Name
(GenBank) AraC family transcriptional regulator
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
psee  Pseudonocardia sp. EC080625-04
Pathway
psee03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:psee00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FRP1_22275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psee03000]
    FRP1_22275
   03400 DNA repair and recombination proteins [BR:psee03400]
    FRP1_22275
Enzymes [BR:psee01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     FRP1_22275
Transcription factors [BR:psee03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    FRP1_22275
DNA repair and recombination proteins [BR:psee03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     FRP1_22275
SSDB
Motif
Pfam: AlkA_N Ada_Zn_binding HTH_18 HhH-GPD HTH_AraC RecR_HhH HHH
Other DBs
NCBI-ProteinID: ALE76577
Position
4814013..4815497
AA seq 494 aa
MLLDHDTCYRAVAAKDQRFDGQFVTAVRTTGIYCRPSCPVPPPKARNVEFLRTAAAAQSA
GYRACRRCLPDAVPGSPEWNLRADAAGRAMRLIADGVVEREGVPGLASRLGYSPRQLGRI
LTAELGAGPLALARAQRAHTARVLVETTPLGLADVAFAAGFGSVRQFNDTVRGVYGVPPS
RLRSEAARRRGAAHAAPGTITLRLPYRAPFDPHGLLDHLAARAVDRVERVDGGTYRRTLR
LPHGPASVALDLTARPGAVLATLRTTDPRDVGPAVSRLRRLLDLDADPLAVDTALAADPV
LAPLVAATPGIRLAGTADPAETAVRTVLGQQVSVAAARTAASRIAASHGTELPPALRDDD
GPDLLFPAPETLADVELAGPARRAASLRGLCSALASGELVLDAGREPDALRAELRTLPGI
GPWSAGYLAMRVLGDPDELLASDLAVRRGAAALGLPGEEDALTGRARAWAPWRSYAATHL
WRAATSAPAVRRNA
NT seq 1485 nt   +upstreamnt  +downstreamnt
gtgctgctcgaccacgacacctgttaccgcgccgtcgccgcgaaggaccagcggttcgac
ggccagttcgtcacggcggtgcgcacgaccggcatctactgcaggccgtcctgcccggtg
ccgccaccgaaggcacgcaacgtcgagttcctgcgcacggcggcggccgcccagtcggcc
ggctaccgggcgtgccggcggtgcctgcccgatgccgtcccggggtccccggagtggaac
ctgcgggcggacgccgccgggcgggcgatgcggctgatcgccgacggcgtcgtcgaacgg
gagggggtgcccgggctcgcgtcgcgactcgggtactcgccccggcagctcggccggatc
ctcaccgccgagctcggcgccgggccgctcgcgctggcccgcgcgcagcgcgcgcacacc
gcccgcgtcctggtggagacgacgccgctcggcctggccgacgtcgcgttcgccgccggg
ttcggcagcgtgcgccagttcaacgacaccgtccgcggcgtctacggcgtaccgccgtca
cggctccggagcgaggccgcgcggcggcggggtgcggcgcacgcggcaccggggacgatc
acgctccggctgccgtaccgggccccgttcgacccgcacgggttgctcgatcacctggcc
gcccgcgccgtcgaccgggtcgaacgcgtcgacggcggcacctaccggcggacgctgcgc
ctgccgcacggcccggcgtcggtcgcgctcgacctgaccgcccggcccggcgccgtgctg
gcgacgctgcgcacgaccgacccgcgcgacgtcggcccggcggtgtcccggctgcgccgg
ctgctcgatctcgacgccgacccgctcgccgtcgacaccgcgctggccgccgacccggtc
ctcgccccgctcgtcgcggcgacgccggggatccggctggcgggcaccgccgatccggcc
gagacggccgtccgcaccgtgctcggccagcaggtctcggtcgccgcggcacggaccgcg
gcgtcccggatcgcggcgtcgcacgggacggagctgccacccgccctgcgcgacgacgac
ggccccgacctgctcttccccgccccggagacgctcgccgacgtcgagctcgccggtccg
gcgcggcgcgccgcctcgctgcgcgggctgtgctccgcgctcgcgtcgggagagctcgtg
ctcgacgccggacgcgaacccgacgcgctgcgcgccgagctgcggacgctgcccgggatc
gggccgtggagcgccggctacctcgcgatgcgggtgctcggcgatcccgacgaactgctg
gcgtcggacctcgcggtgcgccgcggggccgcggcgctcggcctgcccggcgaggaggac
gcgctcaccgggcgcgcccgcgcctgggcgccctggcggtcctacgccgccacccatctc
tggcgggcggccacgtccgcccccgccgtcaggaggaacgcatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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