KEGG   Pseudonocardia sp. HH130629-09: XF36_04630
Entry
XF36_04630        CDS       T04082                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pseh  Pseudonocardia sp. HH130629-09
Brite
KEGG Orthology (KO) [BR:pseh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pseh03019]
    XF36_04630
   03009 Ribosome biogenesis [BR:pseh03009]
    XF36_04630
Messenger RNA biogenesis [BR:pseh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     XF36_04630
Ribosome biogenesis [BR:pseh03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    XF36_04630
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: ALE82516
UniProt: A0A0M4Q8K4
Position
complement(972533..973165)
AA seq 210 aa
MTDRLVWIDCEMTGLDLGSDALIEIAALVTDGDLNILGEGVDVVIACDDAKLDAMPDVVR
DMHARSGLTAEVRRATVTVEQAEKMVLDYVRTHVPDARSAPLAGNSIATDRGFIARDMTE
LDSYLHYRMIDVSSVKELARRWFPRVFYAKPEKGLAHRALADIRESIRELAYYRQALFVA
PPGPTTEQAQAAAAAVARVAAPPQTGTTPG
NT seq 633 nt   +upstreamnt  +downstreamnt
atgaccgatcggctggtgtggatcgactgcgagatgaccgggctggatctgggctccgac
gccctgatcgagatcgcggcgctggtcaccgacggcgacctcaacatcctcggcgagggc
gtcgacgtggtgatcgcctgtgacgacgcgaagctcgacgcgatgcccgacgtcgtccga
gacatgcacgcccggtccgggctgaccgccgaggtccggcgcgcgacggtcacggtcgag
caggccgagaagatggtgctcgactacgtccgcacccacgtcccggacgcccgctccgcg
ccgctggccggcaactcgatcgccaccgaccgcgggttcatcgcccgggacatgaccgag
ctggactcatacctgcactaccggatgatcgacgtcagctcggtgaaggagctggcgcgg
cgctggttcccacgggtgttctacgcgaagccggagaagggcctcgcgcaccgcgcgctc
gccgacatccgcgagtcgatccgcgagctggcctactaccggcaggcgctgttcgtggca
ccgcccggtccgacgaccgagcaggcgcaggccgcggcggccgcggtcgcgcgcgtcgcg
gcacccccgcagaccggtacgacccccggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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