KEGG   Pseudonocardia sp. HH130629-09: XF36_20525
Entry
XF36_20525        CDS       T04082                                 
Name
(GenBank) AraC family transcriptional regulator
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
pseh  Pseudonocardia sp. HH130629-09
Pathway
pseh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pseh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    XF36_20525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pseh03000]
    XF36_20525
   03400 DNA repair and recombination proteins [BR:pseh03400]
    XF36_20525
Enzymes [BR:pseh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     XF36_20525
Transcription factors [BR:pseh03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    XF36_20525
DNA repair and recombination proteins [BR:pseh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     XF36_20525
SSDB
Motif
Pfam: AlkA_N Ada_Zn_binding HTH_18 HTH_AraC HhH-GPD RecR_HhH HHH
Other DBs
NCBI-ProteinID: ALE85237
UniProt: A0A0M5LU71
Position
4470412..4471920
AA seq 502 aa
MLLDHDSCYRAVAARDARFDGQFVTAVRTTGIYCRPSCPVPPPRSRNVEFLRTAAAAQTA
GYRACRRCLPDAVPGSPEWNLRADAAGRAMRLIADGVVERDGVPGLASRLGYSPRQLGRI
LTSEVGAGPLALARAQRAHTARILVETTPLGLADVAFAAGFGSVRQFNDTVRAVYGVPPS
QLRAEAARRTRNREPGPPGALVLRLPYRSPFDPHGLLDHLAARAVDGVETVGGGTYRRTL
RLPHGPAAVALDLTARPGAVVATLRASDPRDVGPAVSRLRRLLDLDADPLAVDAVLGADD
ALAPLVAATPGIRLAGTVDPAETAVRTVLGQQVSVAAARTAAARLAATHGTPLPAELCDD
DGPHLLFPAPGALVDADLAGPARRASSLRGLCAALADGTLALDPGRDPDDLRAELCALPG
IGPWSAGYLAMRVLGDPDELLASDLAVRRGAEALGLPGDGAALTARARAWAPWRSYAATH
LWRAATSTTTTTTTTTTARRSA
NT seq 1509 nt   +upstreamnt  +downstreamnt
gtgctgctcgaccacgactcctgctaccgcgccgtcgccgccagggacgcgcggttcgac
ggccagttcgtcacggccgtgcgcaccaccggcatctactgccgtccgtcctgcccggta
ccgcccccgcgctcgcgcaacgtcgagttcctgcggaccgcggccgccgcgcagaccgcg
ggctaccgggcctgccggcggtgcctgcccgacgccgtccccggctcgccggagtggaac
ctgcgtgccgacgccgcggggcgggccatgcgcctgatcgccgacggcgtcgtcgagcgc
gacggggtccccgggctcgcgtcgcggctgggctactcgccccgccagctcggccggatc
ctcacctccgaggtgggtgccgggccgctggccctggcccgcgcgcagcgcgcgcacacc
gcccgcatcctggtcgagaccaccccgctcgggctggccgacgtcgcgttcgccgccggg
ttcggcagcgtccggcagttcaacgacaccgtccgcgccgtctacggcgtcccgccgtcc
cagctgcgcgccgaggccgcacgccgcacgcgcaaccgcgagcccggcccgcccggggca
ctcgtgctgcggctgccctaccggtccccgttcgacccgcacggtctgctcgaccacctc
gcggcccgcgcggtcgacggtgtcgagacagtcggcggcggcacctaccgccgcacgctg
cggctgccgcacggaccggccgccgtcgcgctggacctgaccgcgcggcccggggccgtg
gtggcgacgctgcgggcgtccgacccgcgggacgtcgggcccgcagtgtcccggctgcgc
cggctgctcgacctcgacgccgacccgctcgccgtcgacgccgtgctgggtgccgacgac
gcactcgcccccctggtcgccgcgacgcccgggatccggctggcgggcaccgtcgacccc
gccgagacggcggtccgcacggtgctgggccagcaggtgtcggtcgccgccgcccgcacc
gccgcggcccggctcgcggccacgcacgggacgccgctgcccgcggagctgtgcgacgac
gacgggccgcacctgctgttccccgcgccgggggccctcgtcgacgccgacctcgcgggc
ccggcccgacgggcgtcgtcgctgcgcgggctgtgtgccgcgctcgccgacggcacgctc
gccctcgaccccgggcgcgacccggacgacctgcgcgccgagctgtgcgcgctgcccggg
atcggcccctggagcgccggctacctggccatgcgtgtcctgggcgaccccgacgagctg
ctcgcctccgacctcgcggtgcgccgcggcgccgaggcgctcggactgcccggcgacggg
gccgcgctcaccgcgcgcgcccgcgcctgggccccctggcggtcctacgccgccacccat
ctctggcgggccgcgacgtccaccaccaccaccaccaccaccaccaccaccgctcggagg
agcgcatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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