KEGG   Pseudomonas sp. StFLB209: PSCI_0714
Entry
PSCI_0714         CDS       T03623                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
pses  Pseudomonas sp. StFLB209
Pathway
pses03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pses00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PSCI_0714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pses03019]
    PSCI_0714
Enzymes [BR:pses01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PSCI_0714
Messenger RNA biogenesis [BR:pses03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     PSCI_0714
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25
Other DBs
NCBI-ProteinID: BAP41416
UniProt: A0A077LC97
Position
779570..781069
AA seq 499 aa
MTVLKALKKMFGKSEAEPLAPVPTTSSSAAVISTESHPARTAAPQPAKPQDSTQAPPRPM
RADKPRADKPAEDKAVAKPRAERQRPARKPKPVDTWKPEDFVVEPQEGKTRFHDFKLAPS
LMHAIHDLGFPYCTPIQAGVLGYTLKGQDAIGRAQTGTGKTAAFLISTITQLLQTPAPKE
RYMGEPRALIIAPTRELVVQIAKDAAALTRYTGLNVMTFVGGMDFDKQLKQLESRFCDIL
VATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFS
ATFTDDVMNLARQWTTDPAIVEIEAEGVANANVEQHVYAVAAADKYKLLYNLVSDNGWER
VMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGR
GIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGAEGVSISFAGEDDSYQLPAIEEKLGRK
ISCEMPPTELLRAVERKRS
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgaccgtgctcaaagcactcaagaagatgttcggtaaaagcgaggctgagccgctcgcg
cctgtgccgacaacatccagttccgctgccgtgatcagcactgaaagccacccagcccga
actgccgcgccgcagccggccaagccccaggacagcacgcaggccccgccacgcccgatg
cgggcagacaaaccccgtgcagacaaacctgccgaggacaaggcagtggcgaagccgcgc
gccgaacgccagcgcccggcccgcaaacccaagcccgtcgacacctggaagcctgaagat
ttcgttgtcgaacctcaggagggcaagacccgcttccatgacttcaagctcgccccgtcg
ctgatgcacgccattcacgatctgggctttccttattgcaccccgatccaggccggcgtt
ctgggttataccctcaagggtcaggacgccattggtcgggcccagaccggcaccggcaag
accgcagcctttctgatttcgaccattacccagttgctgcagaccccagcgcccaaagag
cgctacatgggcgagccgcgcgcgctgatcatcgccccgacccgcgagctggtggtccag
atcgccaaggacgctgcagcgctgacccgctacaccgggctgaacgtgatgaccttcgtc
ggcgggatggacttcgacaagcagctcaagcagctcgaatcgcgcttttgcgacattctg
gtcgccactccgggccgtctgctggacttcaatcagcgtggcgaagtgcatctggacatg
gtcgaagtcatggtcctcgacgaggctgaccgcatgctcgacatgggtttcattccccag
gtgcgccagatcatccgccagacgccgcccaagagcgaacgtcagaccctgctgttttcg
gccaccttcaccgatgatgtgatgaacctggccaggcagtggaccactgacccggcgatt
gtcgagatcgaggccgagggcgtggccaatgccaatgtcgagcagcatgtgtatgcggtg
gctgcggccgacaagtacaagctgctgtacaacctggtcagcgacaatggctgggagcgg
gtgatggtgtttgccaaccgcaaggatgaggtacgccgtatcgaggagcgcctggtgcgc
gatggcgtgaatgctgcgcagttgtccggtgatgtgccgcagcacaagcggatcaagacg
ctggaggggtttcgcgagggcaagattcgtgtgctggtcgccaccgatgtggcaggtcgg
gggattcacatcgacggtatcagccatgtgatcaacttcaccttgcctgaggtcccggat
gattatgtgcaccgtatcggtcgtacaggccgggccggtgccgagggtgtatcgatcagt
tttgccggtgaggatgattcgtaccagttgccggcgatcgaggaaaagctggggcgcaag
atcagttgcgagatgccgccgaccgaactgctgcgggcagtggagcgtaagcgctcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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