KEGG   Pseudomonas sp. TKP: U771_29460
Entry
U771_29460        CDS       T02969                                 
Name
(GenBank) RNA helicase
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
psk  Pseudomonas sp. TKP
Brite
KEGG Orthology (KO) [BR:psk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psk03009]
    U771_29460
Enzymes [BR:psk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     U771_29460
Ribosome biogenesis [BR:psk03009]
 Prokaryotic type
  rRNA helicases
   U771_29460
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 PRAI
Other DBs
NCBI-ProteinID: AHC38355
Position
6453853..6455238
AA seq 461 aa
MTTIATAFNTLPLSAAMLANLDSLGYAEMTQIQAQSLPVILKGLDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVMCPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSLGPQIA
SLEHGAHVIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLDMGFYDAIEDIISKTPAR
RQTLLFSATYPVSIKQLASKFMRAPQQVKAEAFHSDDQIEQRFFEISPEERMDAVTKVLA
HFRPASCVAFCFTKQQVQETVDHLTSKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDSLDMVINVELARDSEIHIHRVGRTGRAGETGIAISLVAPSEAHRAQAIE
QLQKSPLNWDQLDNLKPQSGGPLLPQMSTLCIAAGRKDKVRPGDILGALTGEAGIPGAQV
GKIAIFDFQAFVAVERGVAKQALQRLNDGKIKGRSLRVRIL
NT seq 1386 nt   +upstreamnt  +downstreamnt
gtgaccaccatcgccaccgcttttaatactttgccgctctccgccgccatgctggctaac
ctcgactcgctgggttatgccgagatgacgcagatccaggcgcaaagcttgccggtgatc
ctcaaggggctggacctgatcgcgcaggccaagaccggcagtggcaagaccgccgccttc
ggcatcggcctgctgaacccgatcaacccgcgctacttcggctgccaggccctggtgatg
tgcccgacccgtgagctggccgaccaggtcgccaaggaaatccgtcgcctggcccgtgcc
gaagacaacatcaaggtgctgaccctgtgcggtggcgtgtccctcggcccgcagatcgcc
tccctggaacatggcgcccacgtgatcgtcggcaccccgggccgtatccagcagcacctg
cgcaagggttcgctggtgctcgatggcttgaacacgctgatcctcgacgaagccgaccgc
atgctcgacatgggcttctacgacgccatcgaagacatcatcagcaagaccccggcacgc
cgccagaccctgctgttctcggccacctacccggtgagcatcaagcagttggcctccaag
ttcatgcgcgcgccgcagcaagtcaaagccgaagccttccactccgacgaccagatcgag
cagcgtttcttcgaaatctcgccggaagagcgcatggacgcggtgacgaaagtcctcgcg
cacttccgcccggcatcgtgcgtggcgttctgcttcaccaagcagcaagtgcaggaaacc
gtcgaccacctgacgtccaagggtatttccgccgtcggcctgcatggcgacctggaacag
cgcgaccgcgaccaggtactggcgatgttcgccaaccgcagcacctcggtgctggtggcg
accgacgtcgccgcccgtggcctggacatcgactcgctggacatggtgatcaacgtcgaa
ctggcccgcgactcggaaatccacatccaccgcgtcggccgtaccggtcgtgccggtgag
accggcatcgccatcagcctggtggcgccttccgaagcgcaccgcgcccaggccatcgag
caactgcaaaagtcgccgttgaactgggaccaactggacaacctcaagccgcaaagcggt
ggcccgctgctgccgcagatgagcaccctgtgcatcgccgccggccgtaaagacaaagtg
cgcccgggcgatatccttggcgcattgaccggggaagccggcatcccaggcgcccaggtg
ggcaagatcgcgatctttgacttccaggccttcgtggccgtggagcgtggcgtcgccaag
caggcgttgcagcgtttgaatgacggcaagatcaagggccgttcgttgcgcgttcgcatc
ctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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