KEGG   Pseudoalteromonas sp. SM9913: PSM_A3012
Entry
PSM_A3012         CDS       T01374                                 
Symbol
birA
Name
(GenBank) biotin--protein ligase
  KO
K03524  BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Organism
psm  Pseudoalteromonas sp. SM9913
Pathway
psm00780  Biotin metabolism
psm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:psm00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00780 Biotin metabolism
    PSM_A3012 (birA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psm03000]
    PSM_A3012 (birA)
Enzymes [BR:psm01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.15  biotin---[biotin carboxyl-carrier protein] ligase
     PSM_A3012 (birA)
Transcription factors [BR:psm03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PSM_A3012 (birA)
SSDB
Motif
Pfam: BPL_LplA_LipB HTH_11 BPL_LplA_LipB_2 BPL_C HTH_24 MarR_2 HTH_20 HTH_5 Fe_dep_repress HTH_AsnC-type HTH_IclR HTH_Crp_2 HTH_10 HTH_1 HTH_28 TrkA_TMD HTH_DeoR HTH_6 Rrf2
Other DBs
NCBI-ProteinID: ADT69925
Position
I:complement(3197203..3198195)
AA seq 330 aa
MKAPDGNKLAILNALNKGGFVSGQALGEELGISRAAVSKHIQSLQAMGLDVFKVTGKGYC
LNNQVGLLNQEKIQQLYAELGQNTANIEVQPLIDSTNSELMRRIQAKTPLQSGKVIVAEM
QQAGRGRRGRVWQSPFGANLYYSYFWRLDDGLQAAMGVSIAVGLAVYDAIKALYGIDVEL
KWPNDIYINKQKLAGVLVELDGQPQGPCQLVIGIGINLNMPKSASQHIDQAWTDLSQHTQ
QLDKNQLVASLTYWLEQRLAQYRENGLQTMYQQWNALNAFAGEQVELNTGHRSWRGICEG
IDAHGGVRIRQDGEVKSYYGGEISLRKAQA
NT seq 993 nt   +upstreamnt  +downstreamnt
atgaaagcacctgatggaaacaagctggctattttaaatgcgcttaataaaggcgggttt
gtctctgggcaagctttaggagaggaattaggaattagtcgtgccgctgttagtaaacac
attcaaagcctacaagctatgggcttagatgtatttaaagttacaggtaaaggctattgc
ttaaataaccaagtagggttacttaatcaggaaaaaatacaacagctttatgctgagtta
gggcaaaataccgctaatattgaagtgcagccgctcattgattcaaccaacagcgaacta
atgcgccgcattcaggctaaaacaccacttcagtcgggcaaggtaatcgttgccgaaatg
cagcaagcagggcgcgggcgtcgagggcgtgtatggcaatcgccatttggtgccaactta
tactacagctatttttggcgattagatgatggtttacaagccgctatgggtgtatcgatt
gcggttggtttagcggtgtatgatgcgataaaagcactttatggtattgatgtagagtta
aagtggccaaacgacatttacataaacaaacaaaagctcgctggcgtattagttgaatta
gacgggcaaccacaagggccctgtcagttggtgataggaattggtattaatttaaatatg
ccaaaaagtgccagtcagcacattgaccaagcatggacagatttaagtcagcacacccag
cagctagataaaaatcaattagtagcttcattaacttattggttagagcagcgcttagcg
caatatcgcgagaacggcttacaaactatgtatcaacaatggaatgcattaaatgcgttt
gcaggcgagcaggtagagcttaatactgggcatcgtagttggcgtggcatttgtgaaggt
atagatgcgcacggtggtgtacgtattcgccaagacggcgaagtaaaaagttattatggc
ggcgagatttcattaagaaaggcgcaagcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (38)   

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