KEGG   Candidatus Phytoplasma solani: S284_01640
Entry
S284_01640        CDS       T02881                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
psol  Candidatus Phytoplasma solani
Pathway
psol03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:psol00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    S284_01640 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psol03021]
    S284_01640 (rpoA)
   03400 DNA repair and recombination proteins [BR:psol03400]
    S284_01640 (rpoA)
Enzymes [BR:psol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     S284_01640 (rpoA)
Transcription machinery [BR:psol03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     S284_01640 (rpoA)
DNA repair and recombination proteins [BR:psol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      S284_01640 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 HTH_6 RAD51D_N
Other DBs
NCBI-ProteinID: CCP88101
UniProt: A0A421NXT5
Position
166086..167069
AA seq 327 aa
MKNLKFIKPFFVEELDENLTSGKFIIQPLERGYGITIGNALRRILLSSLPGAAIVNVKIE
GVEQEFTTIPGVYEDVMTIILNLKKIVFKVDDESDDFEEQLEINLTGPKKVTAACFELPA
GVTIINPKHHIATISDNINFHMTVTIKKGIGYVGAKDNKIHSENQIGVIAIDSLFTPVLD
VAYQVEKKLGNKDELTIQITTNGAAVAKEALVTAAKILVEHFNVIVELSQKVANIEFIPE
TKEEAHNYVLDLEIEQLDLSVRLFNSLKRAGINTVAALVKLSEKEVVKLKSLGRKSFQEL
KDKFVEYGLEFNDYLKEALHHSTEEDK
NT seq 984 nt   +upstreamnt  +downstreamnt
atgaaaaatcttaaatttattaaacctttttttgttgaagaactagatgaaaaccttact
tctggcaaatttataattcaacctttagaaagaggttatggcatcaccattggaaacgct
ttaagaaggattttattatcttctttacctggagctgctattgttaatgtcaaaattgaa
ggggtagaacaagaatttactaccattcctggtgtttatgaagatgttatgactatcatt
ttgaacttaaaaaaaattgtttttaaagtcgatgatgaatcagatgattttgaagaacaa
ttagaaattaatctaaccggtccaaaaaaagttaccgctgcttgttttgaattacctgct
ggcgttacaatcattaaccccaaacatcacattgctactatttcagataacattaacttt
catatgacagttactattaagaaagggattggttatgtgggcgctaaagacaataaaatt
catagcgaaaatcaaattggtgttatcgcaattgattctttgttcaccccagttttagat
gtagcttatcaagttgaaaaaaaattaggaaacaaagatgagttaactattcaaatcact
accaatggagctgcagttgccaaagaagccctagtcactgctgctaaaattttagtagaa
catttcaatgtgatagttgagttaagtcaaaaggtagctaatattgagtttattcccgaa
actaaagaagaagctcataattacgttcttgacttagaaattgaacaattagacttatca
gttagactttttaatagccttaaaagggctggcattaacacagttgctgctttagttaaa
cttagtgaaaaagaagtggtgaaactaaaaagtttaggtcgtaaatctttccaagaatta
aaagataaatttgttgaatacggtttagaatttaatgattatctaaaagaagctctccac
cacagcaccgaagaggacaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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