KEGG   Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_4364
Entry
PSPPH_4364        CDS       T00266                                 
Name
(GenBank) ATP-dependent helicase HrpB
  KO
K03579  ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
Organism
psp  Pseudomonas savastanoi pv. phaseolicola 1448A
Brite
KEGG Orthology (KO) [BR:psp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psp03019]
    PSPPH_4364
Enzymes [BR:psp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     PSPPH_4364
Messenger RNA biogenesis [BR:psp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     PSPPH_4364
SSDB
Motif
Pfam: HrpB_C
Other DBs
NCBI-ProteinID: AAZ35228
UniProt: Q48DR1
Position
complement(4985922..4987139)
AA seq 405 aa
MGLGELACDVAALLGERDILRGGGADLHSRLTLLAGTERAARGAQGGVQRAKQLARQYHG
YLRGTAKSPVIDPDHSRWLGALLALAYPDRVAQQRRPGGAEYRLANGRAALFAEADALMK
QPWLVIADLGSRQGQREERIYLAVEFDPALFDSVLAEQVITVDQIDWDEREGVFRAERQR
KAGELIISREPLTGLDDAARSQALLALVRRKGLELLPWTPELRQWQARIALLRSLDIDKS
AASEWPDLSDAQLLATLENWLMPYLGKVTRLSHFSQLDLSSILRNLLPWPMPQQLDAQAP
QTIQVPSGSNVRIDYSEQPPILSVRLQELFGLSDTPRIANGRQVLKLHLLSPARRPVQVT
QDLANFWRSTYIEVKKDLKGRYPKHYWPDDPLVAEATARVKPRGT
NT seq 1218 nt   +upstreamnt  +downstreamnt
ttgggcttgggcgaactggcgtgtgacgtggccgcactgttgggcgagcgcgatattctg
cgcggcggtggggccgatctgcacagccgcctgaccttgctggcgggcaccgagcgtgct
gcgcgtggcgcacagggcggcgtgcagcgagctaaacagctagcacggcaatatcacgga
tacctgcgcggcaccgcgaaaagcccggtcatcgatcccgatcattcacgctggctgggc
gctctgctggcactggcctacccagatcgcgtggcacaacaacgtcgccccggcggtgct
gaatatcgcttggccaacggtcgcgcggcacttttcgccgaggccgacgcactgatgaag
cagccttggctggtcatcgcagatttaggcagccgtcagggtcagcgcgaggaacgcatc
tacctcgctgtcgaattcgatccagcgctgttcgactctgtgctggccgagcaggtcatc
accgtggaccagatagactgggacgaacgcgaaggcgtgttccgcgccgagcgacagcgc
aaagcgggcgagcttattatcagccgcgaaccgctgaccggcctcgatgacgcagcccgc
agccaggcattgctggcactggtgcgtcgtaaaggcctggaactgctgccgtggacgccc
gaactgcgtcagtggcaggcgcgtatcgcgctgttgcgcagcctcgatatcgacaaaagc
gcagcaagcgaatggcccgacctgagtgacgcgcaactgctggcgacactcgaaaactgg
ctgatgccctacctgggcaaagtcacccggctcagccatttcagccagctcgacctgtcc
tccatcctgcgcaacctcctgccgtggccaatgccgcaacaactggatgcgcaggctccg
cagaccatccaggtgccgtctggctcgaatgtccgtattgactacagcgaacagccgccg
attctgtcggtacggctgcaagagttgtttgggttatctgataccccgcgcattgccaat
gggcggcaggttttgaaactgcatttgctgtctccagcacgccgcccggtgcaggtgacg
caggatctggccaacttttggcggtctacctacattgaggtgaagaaggatttgaagggg
cggtatccgaagcattactggccggatgatccgttggtggcggaggctacggctagggtt
aagccgagggggacgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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