KEGG T04158: PS2015

Pseudohongiella spirulinae: PS2015_2658

Entry

PS2015_2658       CDS       T04158

Name

(GenBank) transcription elongation factor NusA

K02600

transcription termination/antitermination protein NusA

Organism

pspi Pseudohongiella spirulinae

Brite

KEGG Orthology (KO) [BR:pspi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pspi03021]
    PS2015_2658
   03009 Ribosome biogenesis [BR:pspi03009]
    PS2015_2658
Transcription machinery [BR:pspi03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     PS2015_2658
Ribosome biogenesis [BR:pspi03009]
Prokaryotic type
  rRNA transcription factors
   PS2015_2658

SSDB

Motif

Pfam:

NusA_N KH_5 HHH_5 S1 HHH_2 KhpA-B_KH UPF0758_N DUF2187 RRP4_S1 MRP-S35

Other DBs

NCBI-ProteinID:

ALO47290

UniProt:

A0A0S2KG88

Position

complement(2894405..2895892)

AA seq 495 aa
MMSKEILAVADAVSNEKGVSRDVIFEAIETALATATKKRFEGEEAECRVAINRKTGQYES
YRVWTVVSDEDFEEPGHQLTLEQAREKDANLDIGDVWEEKIDNAEFGRIAAQTAKQVIVQ
KVREAERDLVVAEYRDRIGQLVSGTVKKVTRESVLVDLGGNAEAVLMRDQMIPREMFRTG
DRIRALLQDVRHEVRGPQLFLSRTAPEMLIELFKIEVPEIADGVIEIRAAARDPGSRAKI
VVSTNDGRIDPVGACVGMRGSRVQVVSNELANERIDIILWDDNPAQLVINAMAPAEVASI
IMDEDSHTMDVAVEEDNLAQAIGRSGQNVRLSAELTGWAINVMSIDEAQEKQQQEASTYI
MAFMNKLDVDEDVAELLVSEGFTSLEEIAYVPMDELLNIDGFDEDIARELRDRARDALLT
QAIASEEGLSSANLEADLLNMEGMDDTLAMALAGKGILNMEDLAEQSIDELMDIDGMDEE
RAGKLIMTARAPWFE

NT seq 1488 nt +upstreamnt +downstreamnt
atgatgagtaaagaaattctggcagttgcagacgcggtctcgaatgagaagggagtgtca
cgtgacgttatattcgaagccatcgaaaccgctctggcaacggctaccaagaaacgcttt
gagggtgaagaagcagagtgccgtgttgcgatcaatcgcaagaccggtcaatacgagtcg
tatcgcgtctggacggtggtttccgatgaagatttcgaagagccgggtcaccagctgacg
ctggagcaggctcgtgaaaaagacgcaaacctggatatcggtgatgtctgggaagagaag
atcgacaatgccgagttcggtcggattgccgcccagactgccaagcaggttattgtacag
aaggttcgtgaggctgagcgcgacctggttgtagccgaataccgtgaccgcattggtcag
ctggtatcgggtaccgtcaaaaaagtgacccgcgagagcgtgctggttgacttgggtggt
aatgcagaagccgtgttgatgcgcgaccagatgatcccgcgcgaaatgttccgcacgggc
gatcgcattcgtgcgctgttgcaggatgtgcgtcatgaagtgcggggtccgcaactgttt
ctgagtcgcactgcaccggaaatgctgattgagctgttcaaaattgaagtgcccgagatc
gccgatggtgtgattgaaattcgtgcggctgccagagatccgggttcacgagccaaaatc
gtggtcagtaccaacgatggtcgaattgatccggttggagcctgcgtgggtatgcgtggt
tcgcgcgtccaggtggtatccaatgaactggccaatgaacgtatcgacatcattttgtgg
gacgataaccccgcgcagctggttatcaatgccatggcgcccgcggaagttgcctcaatt
atcatggacgaagacagtcataccatggatgtggcggtcgaagaagataatctggcacag
gccataggccgcagtggccagaatgttcgtctgtcagccgagctgacaggatgggcgatc
aatgtaatgagcattgatgaagcccaggaaaagcagcagcaggaggccagcacctatatc
atggctttcatgaacaagctggatgtggatgaggatgttgccgagctgctggtcagcgaa
ggtttcacctctctggaggaaatcgcttatgtccccatggatgagctgctgaatatagat
ggttttgacgaagatattgccagggaattacgtgaccgtgcccgggatgcgctgttgaca
caggccatcgcttccgaagaaggcctgtccagtgccaatctggaagctgacctgctgaat
atggaaggcatggacgatacactggcaatggctctggccggaaaagggattctgaatatg
gaagacctggccgaacagtcaattgatgaattgatggatattgacggtatggatgaagaa
cgtgccggcaaactgattatgacggctcgtgcaccgtggtttgagtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (126)   
   KEGG ORTHOLOGY (1)   
   RefGene (123)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (141)   

Download RDF

DBGET integrated database retrieval system