KEGG   Pandoraea sputorum: NA29_24955
Entry
NA29_24955        CDS       T03554                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
pspu  Pandoraea sputorum
Pathway
pspu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pspu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NA29_24955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pspu03400]
    NA29_24955
DNA repair and recombination proteins [BR:pspu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NA29_24955
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 UVR HHH HHH_2 HHH_3
Other DBs
NCBI-ProteinID: AJC19268
Position
complement(4728420..4730591)
AA seq 723 aa
MPADDTSDANDAPLFDARKALSQLPNLPGVYRYYDAVGNVLYVGKARNLKKRVSSYFNKT
QLSPRIALMVARIAKLETTVTRSETEALLLENNLIKALHPRYNILFRDDKSYPFLKLTQH
KYPRMAYYRGSVDRRGQYFGPFPSAWAVRESIQILQKVFQLRTCEDSVFSNRTRPCLLNQ
IERCSAPCVGAIQDEDYARDVNNAAAFLSGRQKEVLGALEDKMMAYAEALQFEQAAVVRN
QMQALSGVLQQQSVETAGDVDADILAVAYAGGRACVNLAMVRGGRHLGDKAYFPAHVERG
VEGGIADEFEEDEVLAELPSEDDSDDAVARPDEGGNDPSTSVAQASSASLESRLLEAFVA
QHYLGQSVPPVLVVSHALPNDELLTALSEQAGRRIAMVRQPQGQRRAWLDMALQGAQLAL
TRLLTEQGSQQARTSELIQTIGLDIDDPALLRVECFDISHTQGEATQASCVVFHHHKMQT
SEYRRYNITGITPGDDYAAMRQVLTRRYGRLMEAAAATVNDAADPLSVAADVARAEADTS
VVAEGDATESTESTESTTSSASSASAAHDIADVEANLPQLVLIDGGKGQVEVARQVFVEL
GIDIGRLVGVAKGEGRKVGLETLIFADGRAPLELGRESAVLMLIAQIRDEAHRFAITGMR
AKRAKARQTSRLEEIEGIGAKRRQRLLMRFGGLQGVVSASVDELASVEGISTTLAEQIYR
QLH
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgcctgcggatgatacgagcgacgccaacgacgcgccgttgttcgatgcgcgcaaagcg
ctctcgcagttgccgaacctgcctggcgtctatcgctactacgacgcggtgggcaacgtt
ctttacgtgggcaaagcgcgcaatctgaagaagcgcgtatcgagttacttcaacaagaca
cagttgtcgccgcgtattgcgttgatggtcgcgcgcattgcgaagctggagacgacggtc
actcgctccgagacggaagcgctgctccttgaaaacaatctgatcaaggcgctgcatccg
cgctacaacatcctgtttcgggacgacaagtcctatccgttccttaagctcacgcaacac
aagtacccgcgcatggcgtattaccgtggctcggtggatcgtcgcggccagtatttcgga
ccgttcccgagtgcgtgggcagtgcgcgagagcatccagattctgcaaaaggtcttccag
ttgcgcacttgcgaagactccgtcttttcgaatcgcacgcgtccgtgtctgctcaatcag
atcgagcgatgcagcgcgccgtgcgtgggcgcgattcaggacgaggactacgcgcgtgat
gtgaacaacgccgccgcgtttctctccggacgtcaaaaggaagtgctcggcgcgctcgaa
gacaagatgatggcctacgctgaagcgctccagttcgagcaggccgctgtcgtgcgcaat
cagatgcaagcgctctccggcgtgttgcagcagcagtccgtcgaaacggcgggcgatgtc
gacgccgacattcttgccgtggcctacgctggcggtcgcgcttgcgtgaaccttgcgatg
gtgcgcggcggacgtcacctgggcgataaggcgtatttcccggcccacgtcgagcggggt
gtcgaaggcgggatcgcggacgaattcgaggaggacgaagtgctggccgagttgccgtcc
gaggatgattcggacgatgctgtggccaggccagacgagggcggcaacgatccgtccacg
agcgtcgcgcaagcgtcgtccgcgtcgctcgaatcgcgtctgctcgaagcgttcgtcgct
cagcactatctcggccagtcggtgccgccggtgctggtggtgagccatgcgttgccgaac
gacgagttgcttaccgcgctctcagagcaagcgggccgccgtatcgcgatggtgcgccaa
ccgcaggggcagcgacgcgcatggctcgacatggcgttgcaaggcgcgcaacttgcgctc
acgcggttgctgacggagcagggcagccagcaggcgcgcaccagtgagctgattcagacc
atcggactcgacatcgacgatcccgcgctgctgcgtgtggagtgtttcgacatcagccat
acgcagggtgaggccacgcaggcgtcatgtgtggtgttccatcatcacaagatgcagacg
agcgagtaccggcgctacaacatcacgggtatcacgccgggcgacgattatgcggccatg
cgtcaggtgctcacgcgccggtacggccgtttgatggaggcggctgcggcgacggtgaac
gacgcagccgatccgctgtcagtggccgcagacgtcgcacgtgccgaggccgacacctcc
gtcgtggcagaaggtgacgcgaccgaatcaactgaatcaaccgaatccaccacatcaagc
gcatcgagcgcgtcggccgctcacgatatcgcagacgtcgaagccaatctcccgcaactg
gtgctgatcgacggcggcaaggggcaggtggaagtcgcgcgtcaggtgttcgttgagctg
gggatcgatattggccgtctggtcggcgtggcgaagggcgaggggcgcaaggtgggtctc
gagacgctgatcttcgctgacggacgggcaccgctcgaactcggtcgcgaaagcgcggtg
cttatgctgattgcgcagatccgcgacgaggcgcaccgtttcgcgatcaccggcatgcgg
gcgaagcgtgcgaaggcgcgtcagacatcgcggctggaggagatcgagggcattggggcg
aagcgccgtcagcgcctgctgatgcgcttcggcggcttgcaaggcgtggtgtccgcgagc
gtcgacgaactggcgagcgtcgagggcatctcgacaacgcttgccgagcagatctatcgc
cagcttcactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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