KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102448158
Entry
102448158         CDS       T02980                                 
Symbol
UBB
Name
(RefSeq) polyubiquitin-B isoform X1
  KO
K04551  ubiquitin B
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04120  Ubiquitin mediated proteolysis
pss04137  Mitophagy - animal
pss04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:pss00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102448158 (UBB)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102448158 (UBB)
   04137 Mitophagy - animal
    102448158 (UBB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pss04121]
    102448158 (UBB)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pss04147]
    102448158 (UBB)
Ubiquitin system [BR:pss04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   102448158 (UBB)
Exosome [BR:pss04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   102448158 (UBB)
  Exosomal proteins of other body fluids (saliva and urine)
   102448158 (UBB)
  Exosomal proteins of colorectal cancer cells
   102448158 (UBB)
  Exosomal proteins of bladder cancer cells
   102448158 (UBB)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 102448158
NCBI-ProteinID: XP_006138755
Position
Unknown
AA seq 381 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGC
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccctgactggcaagaccatcaccctggaggttgaacccagt
gacaccattgagaacgtgaaagccaagatccaggacaaagaaggcatcccccctgaccag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtctgactacaac
atccagaaggagtccaccctccatcttgtgctgcgtctgagaggtggtatgcagatcttt
gtgaagaccctgactggcaagaccatcaccctagaggtggagcccagtgacaccattgag
aatgtgaaagccaagatccaggacaaagaaggcatcccccctgaccagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaaggag
tccaccctccatcttgtgctgcgtctgagaggtggtatgcagatctttgtgaagaccctg
actggcaagaccatcaccctagaggtggagcccagtgacaccattgagaatgtgaaagcc
aagatccaggacaaagaaggcatcccccctgaccagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctgtctgactacaacatccagaaggagtccaccctccat
cttgtgctgcgtctgagaggtggtatgcagatctttgtgaagaccctgactggcaagacc
atcaccctagaggtggagcccagtgacaccattgagaatgtgaaagccaagatccaggac
aaagaaggcatcccccctgaccagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctgtctgactacaacatccagaaggagtccaccctccatcttgtgctgcgt
ctgagaggtggtatgcagatctttgtgaagaccctgactggcaagaccatcaccctggag
gttgaacccagtgacaccattgagaacgtgaaagccaagatccaggacaaagaaggcatc
ccccctgaccagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctg
tctgactacaacatccagaaggagtccaccctccatcttgtgctgcgtctgagaggtggc
tgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5906)   
   KEGG ORTHOLOGY (1)   
   RefGene (5902)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (5928)   

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