KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102456298
Entry
102456298         CDS       T02980                                 
Symbol
EDC4
Name
(RefSeq) LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 4
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pss00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102456298 (EDC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pss03019]
    102456298 (EDC4)
Messenger RNA biogenesis [BR:pss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102456298 (EDC4)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     102456298 (EDC4)
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 102456298
NCBI-ProteinID: XP_025043007
Position
Unknown
AA seq 1333 aa
MGEQAKGLSTGGCSSFPCPGSAPQLVRHWRPEAGHCTPLWGASGIKLRPGCFPVGAVNES
PRPPSSYNGDLNGLLVPDPTAAGDGTPLAKPVLRTVPLGALQEKQVICLSGDDSSTCMVI
SAKDVEIVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLAYAIRGAH
KRTMVLVLSISTAERTLLKGFTGGVADLAFAHLNSNQLACLDEAGSLFVWHLAMDNGKIQ
EEILVNIKRPESTPLNNFRRIIWCPFIPDENEESGEEASQTLALLHEDRAEVWDLDIIRA
NNSSWPVEVTNVKEGFIVVKGHSTCLSEGALSPDGTVLATASHDGYVKFWQIYIEGQDEP
RCLHEWKPHEGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTI
RFSPDIFSSMSVPPSLKACLDLSAEYLILSDVQRKVLYVMELMQNQEEGRAYFSSISEFL
LTHPVLSFGIQAVSRCRLRSFAPPPAWPAHPPDMGQFAHLWGQHSRAGPTPQPCLPPSEG
LSGPLSAAFADPLADLGADGLGSEKGSVHGSQPDLRRIVDLPVPVDFLALANDAKPKLMT
PDAFMTPSTSLQQVAGLPGSSVSSLTSVTALSSASVSDPAVPRPSEDLALSPKIQLDASL
TLSSSSSSLQTSPRNHAILLPGLPDKLAPKAPLPVRPRRPTSPLAPVPAPAGCSAQRAQA
SWQPWFLARPAQGRSSTSWAPGQAQSKTASPWKPRSLALKMGASLVQGHSSGFIVGFTRS
PQLGDLVAEGGSPGSCQTLCPGPDCVPLKSEWRGRICCCGKEPATDPSQRHTGKQDVAST
GSVPELLGALGDRRSDSSAGPGEPGVLALEPSCLFASLLETALTQENASAGSGMGQPWPA
APDITRETRNSMANSPRDDVDEKHKGAAYHRHSYHVLQHDSQDASAEQSDHDDEVASLAS
AAGGFGAKASAQRLPVKDWKAKVSPRASPKLKRKGKREDGDTTQSPRSCDHQGPAACQEE
LMSLLRSQQRELTELGQNQLELMQRLTDHLDAVQSSLMGHMERVIDSQQEQERILPGKPA
PGPAFSPRPQRVGRDTAPLHLAGGPRCMERWALAPLSVQSWGFSGPAPATFRHQAPGGEP
GPGNGSALDGTCPGGLCRVPRARHRFGPGPASAWGPVCPEAPGLIAGGLARPGAGRAAPS
GSLPSMQDSMLAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAASSPPALGRREPSWPW
AAPVSLRPQASPKPRVSXALTAADLNLVLYVCETVDPQQVFGQHPCPLSQPVLLLLIQQL
SSDLGTHTELKLK
NT seq 4002 nt   +upstreamnt  +downstreamnt
atgggagaacaggcaaagggcctctccacaggggggtgcagctcgttcccctgcccaggc
agcgcaccccagctggtcaggcattggcgccctgaggcagggcattgcacgccgctgtgg
ggcgcttctgggattaaacttcgcccgggttgttttcccgtaggtgcagtgaatgaaagc
ccacggccacccagctcgtacaacggggacttgaacgggctgctggtgccggaccccacc
gcagctggagatggcacgcccctggctaaacccgtgctccgaaccgtgcccctgggagcc
ctgcaggagaagcaagtcatctgcctctccggagacgacagctccacctgcatggtgatc
tcggcaaaagatgtggagattgtggccagcagtgactcgagcatcaccagtaaggccaga
gggagcaacaaggtgaaaatccagccagtagcccggtatgactgggagcagaaatactac
tacggcaacctgatcgccgtgtccaactcctacctggcgtacgccatcagaggtgcccac
aaacgcaccatggtgctggtgctgagcatcagcactgccgaacggaccttgctgaaaggc
ttcacgggcggcgtggcagacctggctttcgcccacctcaactccaaccagctggcctgc
ctggacgaggccggcagcctctttgtctggcacctggccatggacaacgggaaaatccaa
gaggagatcttggtgaacataaaacgccccgagagcacccccctgaacaacttccggaga
atcatctggtgccccttcatcccagatgagaatgaggagagcggcgaagaggccagccag
acgttggcactgctgcacgaggacagggcagaggtgtgggatctggatattatccgagcc
aacaacagttcctggccggtggaggtgaccaatgtcaaagagggcttcattgtggtgaaa
ggccacagcacgtgcctcagcgagggagctctctctccggacgggacggtcttggccaca
gccagccacgacggctacgtcaaattctggcagatctacatagaggggcaagacgagcca
cggtgcctgcacgaatggaagccccacgagggcaggccgctctcctgcctgcttttctgc
gataaccacaagaaacaagacccggaggttcctttctggagatttctcatcacgggagcg
gatcagaaccgggagctgaagatgtggtgcaccgtgtcctggacctgcctgcaaactatc
cgcttctcccctgacatcttcagctccatgagtgtcccccccagcctgaaagcctgcctg
gacctctccgccgaatacctgatcctcagcgacgtgcagagaaaagtcctgtacgtgatg
gagctgatgcagaaccaggaggagggcagagcttacttcagctccatttcagagttcctc
ctcacccacccggtgctgagcttcggcatccaggcggtgagccgctgccggctgcgcagc
tttgccccacccccagcctggcccgctcaccccccagatatgggtcaatttgcccatttg
tgggggcagcactcccgtgccggcccaaccccccagccctgtctgcctccttcagaggga
ctttctggccctctctcggcagcctttgcagaccccctggctgacctgggcgcggacggg
ctgggctcggagaagggctcggtgcacggctcccagccagacttgcggcgcatcgtggac
ctgcccgtgcctgtcgatttcctcgccctcgccaacgacgccaagcccaagctgatgacc
ccggatgccttcatgaccccgagtacatcccttcagcaggtggccgggctgccaggcagc
agcgtgagttccctcacctccgtcacagccctgagcagcgcgtccgtcagcgaccccgcc
gtgcccaggccgtctgaagacctggctctgagcccaaagatccagctggacgccagcctc
acgctgagcagcagtagcagcagcctccagacgagtcctaggaaccacgccatcctcctc
ccgggactccctgacaagctggccccaaaggctcccctcccggtgaggccccggcgccca
acgtcccctctcgctcctgtccctgctcctgccggctgcagtgcacagcgggcccaggcc
agctggcagccctggttcctggccaggccggcccagggtcgcagctccaccagctgggca
cccgggcaggcacagagcaagaccgcctctccgtggaagccgcgcagcttggctttgaaa
atgggggcttctctagtgcagggtcactcctccggtttcatcgttggcttcacgcggtct
ccccagctaggagaccttgtggccgagggggggagcccagggagctgccagacgctgtgc
ccaggcccggattgcgttcccctgaaatctgagtggcgcggcagaatctgctgctgcggg
aaagagcccgcaactgatcccagccagcggcacacagggaagcaggacgtagcctccacg
gggtcagttccggagctgctaggtgcccttggggaccgtcgctctgactcttcagcgggg
cccggggagccgggcgtgctggccctggaaccgtcctgccttttcgcctccctcctggag
acggccttaactcaggaaaacgcctctgctggcagtggcatgggccagccctggccggcg
gcccccgacatcaccagggagaccaggaacagcatggccaacagccccagggacgacgtt
gacgagaagcacaagggcgcggcctatcacaggcacagctaccacgtgctgcagcacgac
agccaggacgccagcgcagagcaaagcgaccacgatgacgaagttgcgagtttggcttcg
gcagcgggcgggttcggtgccaaagcgtctgcgcagaggctgccggtgaaggactggaaa
gccaaggtgtccccccgggcgtcccccaagctcaaacggaagggcaagagagaggacggg
gacacgacccagtccccgagatcgtgcgatcaccaggggccggccgcgtgccaggaggag
ctgatgtccctgctgcggagccagcagagggagctgacggagctggggcagaaccagctg
gagctcatgcagaggctcacggaccacctggacgccgtgcagagctccctcatgggccac
atggagcgagtcatcgattcgcagcaggagcaggagcgtatccttccgggcaagcccgcc
ccggggccggccttctcccctcggccccagcgggtgggcagggacacggctcccctgcat
ctcgcgggcggcccccggtgcatggagcgttgggcactcgccccgctgagcgtgcagagt
tggggtttctccggccctgcaccagctaccttcagacaccaagcgcccggaggagaaccg
ggccctgggaatggctcagcactggacgggacctgcccgggagggctctgccgcgttccc
agggcccggcaccgatttggtccagggccagcgtctgcctgggggcccgtgtgcccggaa
gcgccggggctgatagccggaggcctggctcggcccggggcagggagagcagctccgtcc
ggttctcttcccagcatgcaggactcgatgctggcccaggtgcagcgggtcatcaagggc
gaggtgagcctggccatgaaggagcagcaagcggccgtcacctccagcatcgtgcaggcc
atgcgctcggcagcaagctccccgcccgctctggggcggagggagccgagctggccctgg
gctgcgcccgtgtccctccgcccccaggcctccccaaagccacgtgtctcctaggcgctc
accgccgcggacctgaacctggtgctgtacgtctgtgagacggtggacccccagcaggtc
ttcggccagcacccctgcccgctgtcccagcccgtcctcctcctgctcatccagcagctc
tcctccgacctgggcacccacacggagctgaaactgaagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (65)   
   KEGG ORTHOLOGY (1)   
   RefGene (61)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (75)   

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