KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102464050
Entry
102464050         CDS       T02980                                 
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102464050 (DDX46)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pss03041]
    102464050 (DDX46)
Enzymes [BR:pss01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102464050 (DDX46)
Spliceosome [BR:pss03041]
 Complex A
  U2 snRNP components
   U2 related factors
    102464050 (DDX46)
 Complex B
    102464050 (DDX46)
SSDB
Motif
Pfam: DEAD Helicase_C CdAMP_rec
Other DBs
NCBI-GeneID: 102464050
NCBI-ProteinID: XP_006116110
Ensembl: ENSPSIG00000004522
UniProt: K7F9X8
Position
Unknown
AA seq 1036 aa
MGRESRHYRKRSTSRGRSGSRSRSRSPSDKRAKRGEDRRSRSRDRERRRERSRSREKRRS
RSRDRKRLRRSRSRERERSRERRRSRSRERRRSRSRSRRSRSSSPAKNKKTENSSKSKEK
TEGVEVSKEKKKEKEDKEEEKDKDVSNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIG
ELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEEEEIEDEELDPLDAYMEEVKEEVKKFN
MRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAVESEKKKGELMENDQDAMEYSSEEEEVDL
QTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTLEEVNVYRLEMEGIIVK
GKGCPKPIKTWVQCGISMKILSSLKKHGYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKT
IAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGFRVVCVYGGT
GISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQV
MRIVDNIRPDRQTVMFSATFPRAMEALARRILNKPIEVQVGGRSVVCSDVEQEVIVIEEE
SKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIIN
DFKNGVCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGYAFTFI
TEDQARYAGDIIKALELSGKPIPAELEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKFDET
EQALANERKKLQKAALGLQDSDDEDTALDIDEQIESMFNSKKRVKDMAAPGTSNVPTPTA
GNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTIQAPTVSAKT
IAEQLAEKINAKLNYVPIEKQEEEKQEGGQNESFKRYEEELEINDFPQTARWKVTSKEAL
QRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIR
LQNSYQPTNKGRYKVL
NT seq 3111 nt   +upstreamnt  +downstreamnt
atgggccgagagtccaggcattatcggaagcgctccacatcacgtggacgatctggtagc
cgttctagaagtcgatctccatctgacaaaagagcaaaacgtggagaagacagacgatct
agaagtagagatcgagaacgcaggcgtgagaggtcacgcagcagggagaagaggagatct
cggtcacgggacagaaagcgcttgagacgttcaagaagcagagagagggaacggagcaga
gagaggaggaggtcacgcagtcgagagagaaggaggtccagaagcagaagtagacggtca
cgctcctccagtcctgccaagaataagaaaacagaaaacagctcaaagtctaaagaaaag
acagaaggtgtggaagtttccaaagaaaagaaaaaagagaaagaagacaaagaagaagaa
aaggacaaagatgttagtaactttgatcagaacaaactagaggaggaaatgagaaaacga
aaagagagagtggagaaatggagggaagaacagcgcaagaaggctatggaaaacatagga
gaactgaaaaaagaaattgaagagatgaaacaaggaaaaaaatggagcttagaagatgat
gatgatgacgaagaggagactgcagaaggggaaaaggaagaggaggagattgaagatgaa
gaattagatccactggatgcttatatggaagaagttaaagaagaggtcaagaagtttaat
atgagaagtgtgaaaggtggaggtgggagtgaaaagaaatctggaccaactgttaccaaa
gtagtaactgtggtgacaaccaaaaaagcagctgtggaatcagaaaagaagaaaggggag
cttatggagaatgaccaagatgcaatggagtactcatcagaagaggaggaagttgatctt
cagactgccctgacaggttatcagaccaaacagaggaagctgttggaaccagtggatcat
ggaaagatagaatatgagccctttaggaaaaacttctatgttgaagttccagagctggct
aaaatgaccttagaggaggtgaatgtatacaggctggaaatggagggaataatagtaaag
gggaaaggctgccccaaaccaatcaaaacctgggtacagtgtggtatttccatgaagatt
ctcagttccctcaagaaacatggctatgaaaaacccactccaatccaagctcaggctatc
ccagcaattatgagtgggcgtgacttgattggtattgctaaaacaggaagtggaaagact
attgcattcctgttgcctatgttcagacacatcatggatcagagatcgttagaagaagga
gaaggtccaatagctgtcatcatgaccccaacccgagagttggctttacaaattaccaag
gaatgtaagaagttctcaaagacacttgggtttagagttgtctgtgtctatggaggaaca
ggaataagtgaacagattgctgaactaaaaagaggtgctgaaattattgtttgcacacct
ggacgtatgattgacatgttagccgctaacaatggtcgggtgacaaaccttcggagagtt
acatatgttgtactggatgaagcagacagaatgtttgacatgggttttgaaccacaggtc
atgcgcattgtagacaacatcagacctgatcgtcagacagtcatgttctctgccaccttc
cccagagctatggaggcattagctcgtcgaattctgaataagccgattgaggtgcaagtt
ggaggcaggagtgttgtttgttctgatgtggaacaggaggtgattgtgatagaagaagag
agcaagttcctaaagttacttgaactgcttgggcattatcaggagaaaggatctgtcatc
atatttgttgataaacaggaacatgctgatggattgttgaaagatttaatgagagcctct
tatccctgcatgtcacttcatggaggtattgatcaatatgacagagacagcataattaat
gattttaagaatggagtatgcaaacttcttgtggccacatctgtagcagcacgaggcctg
gatgtaaagcaactaatgttggtagtcaattacagctgtcccaaccattatgaagattat
gtgcacagagcaggccgaactggacgagctggcaacaaagggtatgccttcaccttcatt
actgaagatcaagcacggtatgctggtgatataattaaggctttggaattgtcaggaaaa
ccaattcccgctgagctggagaagctctggagtgacttcaaagatcaacagaaggctgag
gggaaaattattaaaaagagcagtggattctctggcaaaggattcaagtttgatgaaaca
gaacaggccttggctaatgagcgaaagaaactacaaaaagctgctcttggccttcaggat
tcagatgatgaagatactgctcttgatattgatgaacaaattgagagcatgttcaattca
aaaaagagagtaaaagacatggcagcaccaggaacatctaatgtgcctacaccaacagct
ggtaatgcagaaaaactggaaattgccaaaagactagctttaagaattaatgctcagaag
aatcttggagcagaggcacaagtattggtcccttttcactttaaggatgtgatgcagcag
gctacaaatgcaatcttgagaggaggcacaattcaggctcctactgtatctgccaaaact
attgcagagcaactggctgaaaagataaatgccaagctcaattatgtacccatagaaaaa
caagaggaagaaaaacaggagggaggacagaatgaatcgtttaagagatatgaggaggaa
ttagagatcaatgatttcccacagactgctagatggaaggttacctccaaggaagctctg
cagagaatcagtgaatattcagaagctgccattactatcagaggaacatatttccctcca
ggcaaagagcctaaggaaggagaacgaaaaatttacttggctatagagagtgccaatgaa
ctcgctgtgcagaaagcaaaagcggaaatcactagacttataaaagaagaacttatcaga
ttgcaaaattcataccagccaaccaacaaaggaagatacaaagttctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (58)   

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