KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102445079
Entry
102445079         CDS       T02980                                 
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss00260  Glycine, serine and threonine metabolism
pss00630  Glyoxylate and dicarboxylate metabolism
pss00670  One carbon pool by folate
pss01100  Metabolic pathways
pss01200  Carbon metabolism
pss01230  Biosynthesis of amino acids
pss01240  Biosynthesis of cofactors
Module
pss_M00141  C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:pss00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    102445079 (SHMT1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    102445079 (SHMT1)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    102445079 (SHMT1)
Enzymes [BR:pss01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     102445079 (SHMT1)
SSDB
Motif
Pfam: SHMT DegT_DnrJ_EryC1
Other DBs
NCBI-GeneID: 102445079
NCBI-ProteinID: XP_006126647
Ensembl: ENSPSIG00000015965
Position
Unknown
AA seq 486 aa
MAHLPSINGELPSAELWTSHNKMVLEPLDTSDPEVYDLIKKEKRRQRVGLELIASENFAS
RAVLEALGSCMNNKYSEGYPGQRYYGGTEFVDELELLCQKRALEVYGLDPQTWGVNVQPY
SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTNKKKISATSIFFESMPYKVNPTT
GYIDYDRLEENALLFHPKLIIAGVSCYSRNLDYSRMRKIADENGAYLLADMAHISGLVAA
GVVPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGARSVDPKTGKEIPYNLESLINQAVFP
GLQGGPHNHAIAGIAVTLKQAMTPEFKAYQQQIVANCKALSAAMMDMGYHVVTGGSDNHL
ILVDLRNRGTDGGRAERVLEVCAIACNKNTCPGDKSALRPSGLRLGTPALTSRGFREQDF
QKVAHFIHKGIELTLRIQNDMSPKATLKEFKERLVSDEKYQVALKSLKEEVEAFATPFPL
PGLPVL
NT seq 1461 nt   +upstreamnt  +downstreamnt
atggctcacttacccagtatcaatggagagcttcccagcgctgaactgtggacgtcccat
aacaagatggtcttggagccgcttgataccagcgacccagaggtgtatgacctcatcaag
aaagagaagcggcgtcagagggttgggttggagctgattgcgtctgagaattttgccagc
cgagcggttctggaggctctaggctcctgcatgaacaataaatactcggaggggtacccg
ggacagagatactacggtgggacggagtttgtggacgagctggagctcctctgccagaag
agagcactggaagtttacgggctggacccacagacatggggggtcaatgtccagccatac
tcaggctccccggctaactttgcggtgtacacggccctggtggagccccatggcaggatc
atgggtctggacttgcctgacggggggcacctgacgcacggcttcatgaccaataagaag
aaaatctcagccacctcgatcttctttgaatccatgccctacaaggtcaatcccaccact
ggctatatcgactacgaccggctggaggagaacgccctcttattccacccaaagctgatc
attgctggcgtcagctgctactcgcgtaacctggactactcccgcatgaggaagatcgcg
gatgagaacggggcttatctcctggctgacatggctcacatcagcgggctggtggcagcc
ggggtggtgccgtcgccatttgaacactgtgacgtggtgtcgaccacaactcacaagacg
ctgcgaggctgcagggccggcatgatcttctatcggaaaggagctcgcagcgtggatccc
aagactggcaaggaaattccatacaacctggaaagcctcatcaaccaagccgtcttccca
ggacttcagggagggccccacaaccatgccatcgcaggaatcgctgtcactttgaagcaa
gccatgaccccagaattcaaagcctatcagcagcagatagtcgcaaactgcaaggccttg
tctgcagccatgatggacatgggctaccacgtcgtcactggtggctcggacaaccacttg
atcctcgtggacctgcgcaacagagggacagacggcgggagagccgagcgggtgctggaa
gtctgtgccattgcctgtaacaagaacacctgccctggtgacaagagtgccttgcgcccc
agcggcctgaggcttgggacaccagcgttgacctccaggggattccgggaacaagacttt
cagaaagtagctcacttcatccacaaagggatagagctgacgctgaggattcagaacgac
atgagccccaaagcaacgctgaaggaattcaaggagaggctggtgagcgatgagaaatac
caagtggctctcaagtctctcaaagaggaggtggaggccttcgctactcccttcccactg
cctggcctgcctgtcctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system