KEGG   Pseudomonas syringae pv. tomato DC3000: PSPTO_5421
Entry
PSPTO_5421        CDS       T00118                                 
Name
(GenBank) lipoprotein, putative
  KO
K11906  type VI secretion system protein VasD
Organism
pst  Pseudomonas syringae pv. tomato DC3000
Pathway
pst03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pst00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSPTO_5421
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pst02044]
    PSPTO_5421
Secretion system [BR:pst02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSPTO_5421
SSDB
Motif
Pfam: T6SS-SciN LPAM_1
Other DBs
NCBI-ProteinID: AAO58843
UniProt: Q87U86
Position
complement(6163099..6163599)
AA seq 166 aa
MSRRSTAFFNMLAALTALLVLAGCSTLSPYSNVTKLNLKLTASDQVNPDLNGRPSPVVVR
LFELKHPVAFENADFFSLYERAKESLAPDMVASEELELRPGETVELKLSLQEGSRYVGVL
AAYRDLPDSRWRYTLQVTPVGITDADLTLDQNGIRNTHEPLAKADD
NT seq 501 nt   +upstreamnt  +downstreamnt
atgtctcgccgctcgactgctttctttaacatgctggctgcgctcaccgccttgttggtg
ctggccggctgctctacgttgtcgccgtactcaaacgtcaccaagctcaacctgaaactg
accgccagcgaccaggtgaacccggacctcaacggtcgcccgtcccccgttgttgtgcgc
ctgttcgagctcaagcacccggtagcgttcgaaaatgcagatttcttcagcttgtatgag
cgcgcaaaagaatctctggccccggacatggttgcgtctgaagagctggagctgcgtccg
ggtgaaaccgtcgagctcaagctcagcctgcaagaaggcagtcgttacgtcggcgttctt
gcagcctatcgggacctgccggacagcagatggcgctacacgctgcaggtaacaccggta
ggtatcactgacgctgacctgactcttgatcagaacggcattcgtaacacccatgaaccg
ctcgccaaggcagatgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system