KEGG   Pantoea stewartii subsp. stewartii: DSJ_04960
Entry
DSJ_04960         CDS       T04970                                 
Name
(GenBank) exodeoxyribonuclease V subunit gamma
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
pstw  Pantoea stewartii subsp. stewartii
Pathway
pstw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pstw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    DSJ_04960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pstw03400]
    DSJ_04960
Enzymes [BR:pstw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     DSJ_04960
DNA repair and recombination proteins [BR:pstw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DSJ_04960
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: ARF48757
UniProt: H3RGZ5
Position
1011371..1014748
AA seq 1125 aa
MFHVYHSNQLDLLKSLAARVIKLDPLDDPFASEMVLVQSPGMAQWLQMELARTFGIAANI
EFPLPASFIWEMFVRVLPDIPPESAFSKASMSWKLMHRLPTLLLQDEFASLRHYLSDDGD
RRKLFQLSARIADLFDQYLVYRADWLNSWERGQQIEGLGEAQVWQAALWRDLVDYTDALG
QPKWHRANLYARFITTLEQAQTRPDNLPQRVFICGISALPPVYLQALQALGRHVDIYLLF
TNPCRDYWGDIQDYAFLAKLQSRQRRRHDREEYRGLFSDVARAPALFSEQGEQHLTNPLL
ASWGKLGRDNLFLLSQMELNSEIDAFVDVEEDNLLHCMQHDLLNLQDRAIIGLTADELAY
SGQKRRLDPQDRSVAIQVCHSAQREVEVLQDHLLALMEADPELKARDIIVMVADIDAYAP
FIQAVFANAPAERYLPFAISDRRASQAHPAIVAFLQLLSLPDSRFVSEDVLALLDVPALA
NHFSIDESGLRLLRRWVSESGVRWGLDDASVEALALPVTGQHTWRFGLQRMLLGYAMESQ
HGDWQGILPYDESSGLVAELAGHLAELLSRLNHWRQVLSEPRPLEAWLPLCRELLNAFFT
PDTETEAALLLVEEQWKTLIEYGMDARFNEAIPVVLLRDDLRGRLDQQRISQRFLAGQIN
FCTLMPMRSIPFSVVCLLGMNDGVYPRTLAPLGFDLMQQQSRKGDRSRRDDDRYLFLEAL
ISAQQQLYISYIGRAIQDNTERYPSVLVTELLEYIGQSLYLPGDEDRELDDSAQRVRAHL
EHLHSRMPFAPENFQPASAAHSFAREWLPAAQGTGQPQPDFVQPLSTPPVETLAFEQFLR
FWRHPVRAWFQQRLGVNFWLEENELPDSEPFALDSLERYQINAQLLNALVTGEDTDRLYA
HHRAAGNLPYGAFGELFWQAQREEMQEVAAEVITQRSEGESREINLALAGVKLTGWLTQV
QSDGLLRWRPGVLNINDGLLLWLEHLVYCALGGDGKSRMFGRQHSYWCFPAVPPDEATDA
LARYMQGYLQGMREPLMLLTKSGGAWLNACFDKKNHQLMTDEATQLKARNALLAAWVGGY
QQEGEGSDPYLQRLCRALDEPRIQQITDAAECWYLPVLQAHQDDR
NT seq 3378 nt   +upstreamnt  +downstreamnt
atgtttcacgtttatcactctaatcagcttgatctgctcaaaagcctggcagcgagagtg
attaaactggatccgcttgacgatccctttgcgtcagaaatggtgctggtgcaaagcccg
gggatggcgcagtggttgcagatggaactggcgcgcacctttggcattgcggcaaatatc
gaattcccgctcccggccagctttatctgggaaatgtttgtgcgcgtcctgccagacatt
ccgccggagagcgccttcagcaaagccagcatgagctggaaactgatgcatcgtttaccc
acgttgctgctgcaggacgagtttgcctcactgcgccattatctgagtgacgacggagac
aggcgcaaactttttcagctcagcgcccgcattgccgacctgtttgaccagtatctggtt
taccgcgcggactggcttaacagctgggaacgcggtcaacagatcgagggcctgggagag
gcgcaggtgtggcaggccgcgttgtggcgtgatttagtcgattataccgacgcgctgggc
cagcccaaatggcatcgtgccaacctctatgcgcgctttattaccacgcttgagcaggca
caaacccgacctgataacctgccgcagcgggtgtttatctgtggtatttcagcgctgccg
ccggtctatttacaggcgttgcaggcgctggggcggcacgttgatatctatctgctgttt
accaatccctgccgtgattactggggcgatattcaggactatgcgtttctggcgaagcta
caaagccgccagcggcggcgtcatgaccgggaagaatatcgcggtttattcagtgatgtg
gcgcgcgcgccagccctgtttagtgagcaaggggaacaacatctgactaacccgctgctg
gcctcctggggcaagttaggccgcgataacctcttcctgctcagccagatggagctgaac
agcgaaatcgatgcgtttgttgacgtcgaagaagacaacctgctgcactgcatgcagcac
gatcttcttaatctgcaggacagggcaatcattggcctgacggcggatgaactggcttac
agtgggcagaaacggcggctggacccgcaggatcgctctgttgccatccaggtttgccac
agtgcgcagcgcgaagttgaagtgctacaggatcatcttctggcgttgatggaagccgat
cctgagctgaaagcgcgggatattatcgtcatggtggccgatattgacgcttacgcgcct
tttattcaggccgtgtttgcaaacgccccggcagaacgctatctgccgtttgccatttct
gaccgtcgtgccagtcaggcgcatcctgctatcgttgcgtttctgcaattactgtcactg
ccggacagccggtttgtctctgaagatgtgctggcgctgctggatgtcccggccttagcg
aatcacttctcgattgacgaaagcggcctgcgtctgttgcgccgctgggtcagcgaatca
ggcgtgcgctgggggctggatgatgccagtgtggaagcgctggctctgccggtcaccggt
cagcatacctggcgctttggcttgcaacgtatgctgctgggatatgcaatggaaagccag
catggcgactggcaaggtattctgccttatgacgaatcaagtgggctggtcgccgaactg
gcgggccatctggccgaactgctgtcccggcttaatcactggcgacaggtcttatcggag
ccgcgcccgctggaggcctggctgccgctgtgtcgcgaactgctgaatgccttttttaca
ccggataccgaaacagaagcggcattgctgctggtggaagagcagtggaaaacgctgatt
gagtacggtatggacgcgcgtttcaatgaggcgattccggtcgtgctcctgcgcgacgat
ctgcgtgggcggctggatcagcagcggatcagtcaacgctttctggccgggcaaatcaat
ttttgtaccctgatgccgatgcgctcgattcccttcagcgtggtgtgcttactggggatg
aacgacggcgtttatccgcgcaccttagcgccgctggggtttgacctgatgcagcagcag
tcgcgcaaaggtgaccgtagccgtcgtgatgacgaccgctatctgtttctggaagccctg
atttccgctcagcaacagctctatatcagctatattggccgcgctattcaggacaatacc
gaacgttacccttcggtgctggtcaccgaattgctggagtatatcgggcaaagtttatac
ctgcctggcgacgaggacagggaactggatgacagcgcacagcgggtacgggcacacctg
gaacatttacacagccggatgccgtttgcgccggaaaacttccagcctgcgtcagcggca
cacagctttgctcgtgaatggctgcctgccgcgcagggcaccggtcagccccagcctgat
tttgttcagccgctgagcacaccgcctgtagagacattagccttcgaacagtttctgcgc
ttctggcgtcatccggttcgggcctggtttcagcagcgcctgggggtcaatttctggctt
gaagaaaatgaactgcccgacagtgaaccctttgctctggacagcctggagcgctatcaa
atcaatgcgcagctactgaatgcgctggtaacaggggaggacaccgatcgcctttatgcc
catcaccgcgccgccggcaacttaccttatggggcgtttggcgagctgttctggcaggct
cagcgcgaagagatgcaggaggtggccgcagaggtgatcactcagcgcagtgagggtgaa
agtcgggagatcaatctggcactggcgggcgtcaaattaaccggctggttaacccaggtg
cagagcgatggcctgctgcgttggcgaccgggtgtgctgaatatcaatgacggtttatta
ctgtggctggaacatttagtttattgtgcactgggtggagacggtaaaagtcggatgttt
ggccgacagcacagctactggtgcttccctgccgtgccgccggacgaggcgactgatgcg
ctggcgcgctatatgcaaggctatctgcagggcatgcgcgagcctttgatgttgctgacc
aaaagcggtggcgcctggcttaatgcgtgttttgacaagaaaaatcatcagcttatgaca
gatgaggcgacacagctcaaagcccgtaacgctctgcttgccgcctgggtcggcggttac
caacaggaaggtgagggaagcgatccctacctgcaacggttatgcagggcactggatgaa
ccccggatacagcagataaccgacgcggctgaatgctggtatttaccggtactccaggcg
catcaggacgaccggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system