KEGG   Pedobacter steynii: BFS30_13830
Entry
BFS30_13830       CDS       T04469                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
psty  Pedobacter steynii
Brite
KEGG Orthology (KO) [BR:psty00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psty03032]
    BFS30_13830
   03400 DNA repair and recombination proteins [BR:psty03400]
    BFS30_13830
Enzymes [BR:psty01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BFS30_13830
DNA replication proteins [BR:psty03032]
 Prokaryotic type
  DNA Topoisomerases
   BFS30_13830
DNA repair and recombination proteins [BR:psty03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BFS30_13830
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 Toprim_4 GyrB_hook
Other DBs
NCBI-ProteinID: AOM78152
UniProt: A0A1D7QHJ5
Position
3307053..3309011
AA seq 652 aa
MSEEKDPKSNYSADNIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVYEVVDNSIDEALAGH
ADTIYVNILKDNSIRVEDNGRGIPTGIMQKEQKSALEIVMTVLHAGGKFDKDTYKVSGGL
HGVGVSCVNALSTHLKAQVHREGKLWEQDYEKGKPQYDVKVVGDTDKRGTVITFTPDPEI
FTQTTEYRYDTLASRLRELSFLNKGIKLTLTDERELDEEGNPISELFHSEGGLKEFVQFL
DGGRPSLIAEPIYVEGIKNGIPVELALQYNDSYAENVHSYVNNINTHEGGTHIAGFRRGL
TRTLKAYADKSGLLKNVKFEITGDDFREGLTAVVSVKVQEPQFEGQTKTKLGNSEVMGAV
DVAVGEALSNYLEEYPREAKLIVNKVILAATARAAARKAREMVQRKSVMGGSGLPGKLAD
CSDSDPEKCEIYLVEGDSAGGTAKQGRDRNFQAILPLKGKILNVEKAMEHKIYENDEIKN
MFTALGVSIGTPEDDKALNLTKLRYHKVVIMTDADIDGSHITTLILTFFFRYMKSLIEAG
YVYIAAPPLYQVKKGKDFEYCWNDQQRDAAVQRLKGAGKEESVHIQRYKGLGEMNAEQLW
DTTLNPETRTLLQATIENAAECDHTFSMLMGDEVGPRREFIERNAKYAKIDA
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgagcgaagaaaaggatccaaagtcaaattattcggcagataatatacaggtattagaa
ggtttagaagcggtgcgtaagcgcccttcgatgtatataggagacaccggggtaaaagga
ttacatcatttagtttacgaagtagtagataactctatagatgaggcgttggcaggtcat
gctgacacgatatatgtaaatattcttaaagacaactcgatcagggttgaagataacggg
cgtggtatccctacgggaattatgcagaaagagcagaaatcagctctggaaatcgtaatg
acggtattacacgcgggtggtaagtttgataaagacacctataaagtttccgggggtctg
catggtgtgggggtgagttgcgtgaatgccttgtccacacatttaaaagcgcaggtacac
cgtgaaggaaaattatgggagcaggattacgaaaagggtaaacctcagtatgatgtaaaa
gttgttggagatacggataaaagaggaacggtgatcacctttactccggatcctgagatc
tttacacagactacagagtaccgttatgatactttggccagcaggcttagggaattgtct
ttcctgaataaaggaattaaattaacgcttactgatgagcgtgaactggatgaagaagga
aacccgatttcggagcttttccattcggaaggtggattaaaagagtttgttcagttttta
gatggaggtcgtccttcactgattgcggagccgatttatgtagaaggtattaaaaatgga
attcctgtagagcttgctttacagtacaatgatagctatgctgaaaatgtacactcttat
gtgaacaacatcaatacacatgagggaggtacgcatatcgcaggtttcagaagaggttta
accagaacattaaaagcttatgctgataaatcagggttgcttaaaaatgtgaaatttgag
attaccggtgatgactttagagaaggtttaactgcagttgtttctgtaaaagtacaggag
cctcagtttgaaggtcagacaaaaacaaaactaggtaactctgaggtaatgggtgcagtt
gatgtagccgttggtgaagcgttgagtaactatctggaagaatatccaagagaagcaaag
ctgattgtaaataaggtaattcttgcggctactgcacgtgcagcagcacgtaaggcacgt
gagatggttcaacgcaagagtgtaatgggtggttcaggccttccaggtaagcttgccgat
tgttctgatagtgatccggaaaaatgtgaaatctacctggtggagggagattccgcaggt
ggaacggccaaacaaggccgggatcgtaatttccaggcgattttgcctttgaaaggtaaa
atcctgaacgtggaaaaagcgatggagcataagatctatgagaatgacgagatcaagaat
atgtttactgcacttggtgtaagtatagggacaccggaagatgataaggctttaaattta
acaaagttacgttaccataaggtggtaatcatgacggatgcggatatcgatggatcccac
atcacgacattgattcttacgttcttcttcagatatatgaaaagcctgatcgaagcaggt
tatgtttacattgctgcgccacctctatatcaggtaaaaaaaggtaaagatttcgaatat
tgctggaatgatcagcaacgtgatgctgcggtgcaacgtttaaaaggcgctggtaaagaa
gaaagtgtacatatccaacgctataaaggtcttggagagatgaacgccgagcagttatgg
gacactacccttaacccggaaacgcgtactttgttacaggcaacaattgaaaatgcagcg
gaatgtgaccatactttctctatgttaatgggagatgaagttggtccaagaagagaattc
attgaaagaaatgcaaaatatgctaagattgatgcctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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