KEGG   Pseudomonas sp. VLB120: PVLB_01335
Entry
PVLB_01335        CDS       T02897                                 
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
psv  Pseudomonas sp. VLB120
Pathway
psv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PVLB_01335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psv03019]
    PVLB_01335
Messenger RNA biogenesis [BR:psv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     PVLB_01335
SSDB
Motif
Pfam: NUDIX NUDIX_4 NUDIX_2
Other DBs
NCBI-ProteinID: AGZ33076
UniProt: A0AA86A8R9
Position
308571..309050
AA seq 159 aa
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
ERDDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLVSNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLTRD
NT seq 480 nt   +upstreamnt  +downstreamnt
gtgatcgacccggatggttttcgccctaacgtcgggatcattctcacgaatgatgccggg
caggtgctatgggctcggcggatcaaccaggatgcctggcaatttccccagggcggtatc
aaccctgatgaaacgccggaagatgccctgtaccgcgagctgaacgaagaagttggcctt
gaacgcgacgatgtggaaattcttgcctgcacccgtggctggttgcgttatcgtttaccc
caacgcctggtacgtacccacagccagccgttgtgtatcggccagaagcagaagtggttc
ctgctgcgcctggtgagtaacgaacagcgggtgcggatggacctgaccggcaagccagag
ttcgacggctggcgctgggtcagttattggtacccgctgggccaggtggtgacattcaag
cgcgaggtctaccgacgcgccctgaaagagctagcaccgcgtctgctgacgcgcgactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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