KEGG T04748: DABAL43B

Psychrobacter sp. DAB_AL43B: DABAL43B_2265

Entry

DABAL43B_2265     CDS       T04748

Symbol

truD

Name

(GenBank) tRNA pseudouridine synthase D

K06176

tRNA pseudouridine13 synthase [EC:5.4.99.27]

Organism

psyc Psychrobacter sp. DAB_AL43B

Brite

KEGG Orthology (KO) [BR:psyc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psyc03016]
    DABAL43B_2265 (truD)
Enzymes [BR:psyc01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     DABAL43B_2265 (truD)
Transfer RNA biogenesis [BR:psyc03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DABAL43B_2265 (truD)
Prokaryotic type
    DABAL43B_2265 (truD)

SSDB

Motif

Pfam:

TruD

Other DBs

NCBI-ProteinID:

SLJ85450

UniProt:

A0A1U6GPT0

Position

I:2660701..2661993

AA seq 430 aa
MTSQDDNLNVTATSESAFKNAAYDNEIFANEQPNLSSIDITAATDTAKLPQPIQPPLKRA
TYKAQTTDFIVNEILPLDFTGEGEHLWLHIEKSGMNTAYLAKLLSEWAEIPLRDVGYSGL
KDRHALTTQWFSLRIPKKQLPESEFAPIDIGVDESVTILAQQWHNKKLNRGTHRANQFII
TLRDIEFADLAIETSEQDLSAKQSAKSSIEQRLANISHSGVPNYFGPQRFGRNGNNIRTA
LALFARPPQQSRPQPKKSKRKITPREQNTMELSAARSLIFNEILAARVRDGSWDIGLAGE
VFNLDGSGSIFASEELDDTLQARVKTGDIHPTGVLWGVGNDKVSGAAAAIETDIVDQSPL
LTQLAAGLEQRDIKAQRRALRLPIEALSWEWHDKDDEQALVLNFTLTTGSFATSVLASLV
QELSTSPLSM

NT seq 1293 nt +upstreamnt +downstreamnt
atgacttctcaagatgacaacttaaacgttaccgcgacttctgagtctgcttttaagaat
gctgcctatgacaacgaaatattcgccaacgagcagcccaatctctcaagtatcgatatt
accgcagcgactgatactgccaaattaccgcagcctatacaaccacctttaaagcgcgca
acttataaagcccagacaaccgactttatcgttaatgagatattgccgctcgactttaca
ggcgaaggtgagcatttatggctgcatatagaaaagtcaggaatgaacaccgcttatctt
gccaaattactctctgagtgggcagaaataccattacgcgatgtcggttattctgggctg
aaagaccgtcatgcattaacgacacaatggtttagcctgcggataccaaaaaagcaattg
ccagaatcagaatttgcgccaatagatatcggtgttgatgagtcagtcactattctcgcc
cagcagtggcacaataaaaagctcaatcgcggcacgcatcgcgccaaccaatttatcatt
accttgcgtgatatcgagtttgccgacctagcaatcgaaacgtctgagcaggatttatct
gctaagcaaagtgccaagagcagcatcgagcagcggttagcaaatatcagtcacagcggc
gtgcccaattattttggtccacagcgttttggacgtaacggcaataatattagaaccgct
ttggcattgtttgcccgtccaccacagcaaagtcgaccacaaccaaaaaagagtaaacgt
aaaattacgccgcgagaacaaaataccatggagctctctgccgcacgtagtttgatattc
aatgagatattggcagcacgcgtacgtgatggtagttgggatataggactggcaggcgaa
gtatttaacttagatggttcaggctcgatatttgctagtgaagaattagacgacacttta
caggcgcgagttaagaccggcgacattcatccaacaggtgttttgtggggcgtgggtaat
gataaagttagtggcgctgcggcagcaattgaaactgatatcgtagatcaaagcccacta
ttaactcagctagcggcaggattagagcagcgcgatattaaggcgcaaagacgagcgctg
cgcttacctattgaagcattgagttgggaatggcatgataaagatgatgaacaagcgcta
gtattaaactttactttgacgacaggtagctttgccaccagcgtattggcaagtttggtg
caagaattaagtacatcgccattatctatgtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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