KEGG   Pseudomonas syringae CC1557: N018_00750
Entry
N018_00750        CDS       T03014                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
psyr  Pseudomonas syringae CC1557
Pathway
psyr00300  Lysine biosynthesis
psyr00470  D-Amino acid metabolism
psyr01100  Metabolic pathways
psyr01110  Biosynthesis of secondary metabolites
psyr01120  Microbial metabolism in diverse environments
psyr01230  Biosynthesis of amino acids
Module
psyr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psyr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    N018_00750
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    N018_00750
Enzymes [BR:psyr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     N018_00750
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AHG38849
UniProt: W0MJR2
Position
complement(155951..157198)
AA seq 415 aa
MDAFNYRDGELFAEGVALSGIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQEVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED
VYIRASQLPNLEIIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGVLLTRIEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRDSEPRAYDIVGPICETGDFLAKGRELALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgccttcaactaccgcgacggtgagctgttcgcggaaggggtagccttgtctggc
attgccgagcgcttcggtacgccgacctatgtctactcgcgcgctcacatcgaagcgcaa
taccgagcctacgccgatgcgctgagcggcatgccgcatctggtctgctttgcggtcaag
gccaactccaacctgggtgtactcaatgtcctggcgcgtcttggcgccggttttgacatc
gtttcgcgtggtgagctggagcgcgtgctggcggctggcggcaaggcggaaaaaatcgtg
ttttccggcgtcggcaagacccgcgaagacatgcgccgtgcgcttgaagtcggcgtgcat
tgcttcaatgtcgagtccaccgacgagcttgagcgcttgcaggaagtggctgccgaactc
aatgttcgtgcgccgatttcgctacgcgtcaatccggacgtggatgccggcacccacccg
tacatttccacaggtctgaaagaaaacaagttcggcattgccattgctgctgccgaagac
gtttacattcgcgcctcgcagttgccgaatctggaaatcatcggtgtcgattgccatatc
ggttcacaactgaccacccttgaaccctttatcgatgcactggatcgcctgctggatctg
gtcgaccgtctgggcgattgcggcattcatctgcaccacatcgacctgggtggcggtctt
ggcgtgcgttaccgcgatgaagagccgccgttggcggctgactacatcaaggccgtgcgc
gagcgtcttgccggtcgcgatctgggcctgctgttcgaaccggggcgctttattgtagcc
aatgcgggcgtgctgctcacccgaatcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgatgcggcgatgaacgacctgatccgaccagccctgtatcaagcctggatg
gacgtcacagcggtacgcccgcgtgacagcgaaccgcgtgcctacgacatcgtagggccg
atctgcgaaaccggcgacttccttgccaaaggccgcgaactggcactggccgaaggcgat
ctgctggcggtgcactcggctggcgcttacggttttgtcatgagctcgaactacaacaca
cgtggccgcgccgctgaggtactggtcgacggttcccaggcgtttgaagtgcgtcgtcgc
gaaaccgtggccgagctgttcgctggcgaaagcctgctgccggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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