KEGG   Candidatus Phycorickettsia trachydisci: phytr_8390
Entry
phytr_8390        CDS       T05372                                 
Name
(GenBank) Putative ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ptc  Candidatus Phycorickettsia trachydisci
Brite
KEGG Orthology (KO) [BR:ptc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptc03019]
    phytr_8390
   03009 Ribosome biogenesis [BR:ptc03009]
    phytr_8390
   03036 Chromosome and associated proteins [BR:ptc03036]
    phytr_8390
Enzymes [BR:ptc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     phytr_8390
Messenger RNA biogenesis [BR:ptc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     phytr_8390
Ribosome biogenesis [BR:ptc03009]
 Eukaryotic type
  90S particles
   RNase
    phytr_8390
 Prokaryotic type
  rRNA processing factors
   phytr_8390
Chromosome and associated proteins [BR:ptc03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     phytr_8390
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: AVP87771
UniProt: A0A2P1P933
Position
complement(923662..924387)
AA seq 241 aa
MEDLLKHKYQELELSKLERALNYDFKDKVLLVKALCHPSLKQQYAFKTYLEKQIYDFEKL
EFIGDSVLGLAVIDLLLKTYPYEVHGVLAKFKNYLVSKKVVSSIASKLRLSEFWLMSHGE
KQSGGEVNLSNFENALESLIGAIYIDCGDTKITTPIIQKLWQEEVRNIKNVSLDPKGALQ
ELAHIKHLGIPQYEVISNNNGLFTVRLSLNNMDAEGSAKSKKEAEVLAAQRLLDLLSIKH
N
NT seq 726 nt   +upstreamnt  +downstreamnt
atggaagatcttttaaagcataaataccaagagctagaattatctaagctagagcgagcc
ttaaattatgattttaaagataaagtcttgttagttaaggctctttgtcatccttcttta
aagcaacaatatgcttttaagacttaccttgaaaagcaaatatacgactttgaaaaatta
gaatttataggagatagtgttttggggcttgcggtaatagacctattattaaaaacttat
ccgtatgaagttcacggagttctggcaaaatttaaaaattatctcgtatctaaaaaagtt
gtctcttctattgcatctaagctaaggttgtctgaattttggttaatgagtcatggtgaa
aagcaatctggtggagaggtaaacttaagtaattttgaaaatgctttagagtcattgatt
ggggcaatatacattgattgcggtgatacaaaaattaccactccaattattcaaaaatta
tggcaagaagaggtgcggaatataaaaaatgtgtcattagatccaaaaggtgctttgcaa
gaacttgctcatattaaacatttaggtatccctcaatatgaagtgataagcaataataat
ggattatttactgtacgtctttctttgaataatatggatgcagaggggtctgctaaatcg
aaaaaagaagcagaagtacttgcggctcaaagacttcttgatttactgtctattaaacat
aattag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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