KEGG   Panthera tigris altaica (Amur tiger): 102950262
Entry
102950262         CDS       T02988                                 
Symbol
SMARCA4
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ptg  Panthera tigris altaica (Amur tiger)
Pathway
ptg03082  ATP-dependent chromatin remodeling
ptg04714  Thermogenesis
ptg05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102950262 (SMARCA4)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    102950262 (SMARCA4)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    102950262 (SMARCA4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptg03021]
    102950262 (SMARCA4)
   03036 Chromosome and associated proteins [BR:ptg03036]
    102950262 (SMARCA4)
Transcription machinery [BR:ptg03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102950262 (SMARCA4)
Chromosome and associated proteins [BR:ptg03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     102950262 (SMARCA4)
  Chromatin remodeling factors
   BAF complex
    102950262 (SMARCA4)
   PBAF complex
    102950262 (SMARCA4)
   GBAF(ncBAF) complex
    102950262 (SMARCA4)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C SnAC Bromodomain HSA BRK QLQ ResIII HDA2-3 DEAD DUF2009 Htt_C-HEAT
Other DBs
NCBI-GeneID: 102950262
NCBI-ProteinID: XP_007079408
Position
Un
AA seq 1672 aa
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGAHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKQRGVSTRRSGKRGCQRDASSSRRLSALLPPPRP
LVHTEGLLLAVSPGARTARMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAP
RAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREY
RLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALET
ALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRS
VTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAY
LLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQM
SDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEE
QPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYY
AVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIAL
ITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGK
FNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGT
PLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVL
RPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGT
KTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKL
RATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIF
LLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEE
KILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFA
HTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPK
RKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKVH
AGEGQLGTGSGEQRLAAVPWASSRTRVGSLPAPLGFHYGKGSDELVIEMPCHTVGSASRD
QTTSLWALCLPELDSSPGCEDSKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDS
SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQN
AQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKV
KIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq 5019 nt   +upstreamnt  +downstreamnt
atgtccactccagacccaccgctgggcggaactcctcggccaggcccttccccgggcccg
ggcccctcccctggagccatgttgggccctagcccaggcccctcgccgggctctgcacac
agcatgatggggcccagtccggggcctccctcagcaggacaccccatcccgacccagggg
cctggagggtaccctcaggacaacatgcatcagatgcacaagccaatggagtccatgcac
gagaagggcatgtcggatgatccccgctacaaccagatgaagggaatggggatgcggtcg
ggggcccacgcagggatggggcccccgccaagccccatggaccagcactcccaaggttac
ccctcccctctgggtggctccgagcacgcctccagtccggttccagccagcggcccatcc
tcaggcccacagatgtcctctgggccaggaggggccccgctggacggcgccgatccccag
gctttgggacagcagaaccggggcccgactccgtttaaccagaaccagctgcatcagctc
agagcccagatcatggcctacaagatgctggccaggggccagcccctccccgaccacctg
cagatggcggtgcaggggaaacagcgcggcgtcagcactcggcgctcgggcaagcggggc
tgccagcgcgatgcaagttcctcccgccgcctctccgctctcctccccccaccccgacct
ctcgtccacactgaggggctgttgttggctgtgtcccctggagccaggactgcccgtatg
ggagggcccaacatgccccccccaggaccctcaggtgtgccccctgggatgccaggtcag
ccccccggagggcctcccaagccttggcctgaaggacccatggcgaatgctgctgcccca
cgggcgccccctgccgtcccgcccgccgcctccccggtgatgccgccccagacacagtcg
ccggggcagcctgcccagcctgcccccatggtgcccttgcaccagaagcagagccgcatc
acccccatccagaagcctcggggcctggaccctgtggagatcctgcaggagcgggagtac
aggctgcaggctcgaatcgcacaccgaattcaggaacttgaaaaccttcccgggtccctg
gccggggatttgcgaaccaaagcgaccattgagctcaaggccctcaggctgctgaacttc
cagaggcagctgcgacaggaggtggtggtgtgcatgaggagggacaccgccctggagacg
gccctcaatgccaaggcctacaagcgcagcaagcgtcagtccctgcgagaggcccgcatc
accgagaagctggagaagcagcagaagatcgagcaggagcgcaagcgccggcagaagcac
caggaatacctcaacagcattctgcagcatgccaaggatttcaaagaatatcacagatcg
gtcacaggcaaaatccagaaactcacgaaggccgtggccacgtaccacgccaacacggag
agggaacagaagaaggaaaacgaaaggattgagaaagagagaatgcggaggctcatggct
gaagatgaggagggctaccgcaagctcatcgaccagaaaaaggacaaacgcctggcctac
ctcttgcagcagacggacgagtacgtggcgaacctcacagagctggtgcggcagcacaag
gctgcccaggtcgccaaggagaaaaagaagaaaaagaaaaagaagaaggcagaaaacgca
gaaggacagacgcctgcaatcggacctgatggcgagcctctggatgagaccagccaaatg
agtgacctcccggtgaaagttatccacgtcgagagcgggaagatcctcacgggcacagat
gcccccaaagcagggcagctagaggcctggcttgagatgaaccccgggtatgaagtagct
ccaagatctgatagtgaagaaagtggctcagaagaagaggaggaggaggaggaagaggaa
cagccgcagccagcacagcctcccaccctgcctgttgaggagaagaagaagattccagat
ccagacagcgatgacgtctcggaggtagacgcccggcacatcattgagaatgccaagcaa
gatgttgatgacgagtacggtgtgtcccaggccctggcacggggcctgcagtcctattac
gccgtggcccatgctgtcaccgagagagtggataagcagtcggcgctcatggtcaatggt
gtccttaaacagtaccagatcaaaggcctggagtggctggtgtctctgtacaacaacaat
ctgaacggcatcctggctgacgagatgggcctggggaagaccatccagaccatcgccctc
atcacgtacctcatggagcacaagcggatcaatgggccctttctcatcatagtacctctc
tccacattgtcaaactgggcatacgaatttgacaagtgggccccctccgtggtgaaggtg
tcctacaagggttctccagcagccaggcgtgctttcgtcccccagctccgaagtggcaag
ttcaacgtcttgctgacgacttacgagtacatcattaaagacaagcacatccttgcaaag
atccgttggaagtacatgatcgttgatgaaggccaccgcatgaagaaccaccactgcaag
ctgacgcaggtcctcaacacgcactacgtggccccccgccgcctgctgctgacgggcacg
ccgctgcagaacaagctgcccgagctctgggcgctcctcaacttcctgctgcccaccatc
ttcaagagctgcagcaccttcgagcagtggttcaacgcgccctttgccatgactggggaa
aaggtggacctgaacgaggaggaaaccattctcatcatccgtcgtctccacaaagtgctg
cggcccttcctgctccggcggctcaagaaggaagtcgaggcccagttgcccgaaaaggtg
gaatatgtcatcaagtgtgacatgtctgcgctccagcgtgtgctctaccggcacatgcag
gccaaaggggtgctgctcaccgatggctccgagaaggacaagaagggcaaaggtggcacc
aagaccctgatgaacaccatcatgcagctcaggaagatctgcaaccacccgtacatgttc
cagcacatcgaggagtccttctccgagcacttggggtttaccggtggcatcgtgcaaggg
ctggacctgtaccgcgcctcggggaagtttgagcttcttgataggattcttcccaaactc
cgtgccaccaaccacaaagtgctgctgttctgtcagatgacctccctcatgacgatcatg
gaagattattttgcatatcgcggctttaaatacctcaggctcgacggaacgacgaaagca
gaggaccggggcatgctgctgaaaaccttcaacgagccgggctccgagtacttcatcttc
ctgctcagcacgcgggccggggggctcgggctgaacctccagtcagctgacactgtgatc
attttcgacagtgactggaaccctcaccaggacctgcaagcccaggaccgcgcccaccgc
atcgggcagcagaacgaggtgcgagtgctccgtctctgcacggtcaacagcgtggaagag
aagattctggccgcagccaaatacaagctcaatgtcgaccagaaggtgatccaggccggc
atgtttgaccagaagtcctccagccatgagaggcgcgccttcctgcaggccatcctggag
cacgaggagcaggacgagagcagacactgcagcacgggcagcggcagtgccagcttcgcc
cacactgcccctccgccagcgggcgtcaaccccgacctggaggagccacctctaaaggaa
gaagacgaggtgcccgacgacgagacggtgaaccagatgattgcccggcacgaggaggag
tttgacctgttcatgcgcatggacctggaccgcaggcgtgaggaggcccgaaaccccaag
cggaagccgcgcctgatggaggaggatgagctcccctcgtggatcatcaaggacgatgcc
gaggtagagcgtctgacctgcgaggaggaagaggagaaaatgtttggccgaggctcccgc
caccgcaaggaggtggactacagcgactcgctgaccgagaagcagtggctcaaggtacat
gctggagagggccagttggggacggggtcgggggagcagaggctagctgctgtaccgtgg
gcctcatccagaacccgagtgggctcccttccggcccctcttggttttcattatgggaaa
ggcagcgacgagttagtgatcgaaatgccctgccacacggtagggagtgccagccgggat
cagacaacctcactttgggcactttgcctcccagagctggactcctcacccggctgtgaa
gacagcaagaagcagaagaagcgcgggcggccacccgccgagaagctctcccccaaccct
cccaacctcaccaagaagatgaagaagatcgtagatgccgtgatcaagtacaaggacagt
agtagtggacgtcagctcagcgaggtgttcatccagctgccgtcccgcaaggaactgccc
gagtactacgagctcatccgcaagcctgtggacttcaagaagataaaggagcgcatccgc
aaccacaagtatcgcagcctcaatgacctggagaaggacgtcatgctgctgtgccagaac
gctcagaccttcaacctggagggctccctgatctacgaagattccatcgtcctacagtcg
gtgttcaccagtgtgcggcagaaaattgaaaaagaggacgacagcgagggcgaggagagc
gaggaggaggaggagggcgaggaggaaggctccgagtctgagtcccgctctgtcaaagtg
aagatcaagctcggccggaaggagaaggcacaggataggctgaagggcggccgacggcga
ccgagccgcggatcccgggccaagccggtggtgagcgatgatgacagtgaagaggagcag
gaggaggaccgctcaggaagtggcagcgaggaagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (12)   
   Pfam (12)   
All databases (39)   

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