KEGG   Panthera tigris altaica (Amur tiger): 102959496
Entry
102959496         CDS       T02988                                 
Name
(RefSeq) transcription elongation factor B polypeptide 1-like
  KO
K03872  elongin-C
Organism
ptg  Panthera tigris altaica (Amur tiger)
Pathway
ptg04066  HIF-1 signaling pathway
ptg04120  Ubiquitin mediated proteolysis
ptg05170  Human immunodeficiency virus 1 infection
ptg05200  Pathways in cancer
ptg05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102959496
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    102959496
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102959496
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    102959496
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    102959496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptg04121]
    102959496
   03400 DNA repair and recombination proteins [BR:ptg03400]
    102959496
Ubiquitin system [BR:ptg04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     102959496
   Cul5 complex
     102959496
DNA repair and recombination proteins [BR:ptg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     102959496
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 102959496
NCBI-ProteinID: XP_015395127
Position
Un
AA seq 112 aa
MMDGEEKTYGGCEDPAMDVISISSDGHEFVVKREHALTSGTIKTMSSGPGHFAENETNEV
NFREIPSHVLSKVCTYFTYKVRYTNSFTEIPEFPIAPEIALELLMAENFLDC
NT seq 339 nt   +upstreamnt  +downstreamnt
atgatggatggagaagagaaaacctatggcggctgtgaagatcctgccatggatgtcata
tcaatatcttcggatggtcatgaatttgttgtcaaaagagaacatgcactaacatccgga
acaataaaaaccatgtcgagtggccctggtcactttgctgagaacgaaactaatgaagtc
aattttagagagatcccttcacatgtgctatcaaaagtatgcacgtattttacctacaag
gttcgctacactaacagcttcacagagattcctgaattcccaattgcacctgaaattgca
ctggaactgctgatggctgagaactttctagattgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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