KEGG   Panthera tigris altaica (Amur tiger): 102965633
Entry
102965633         CDS       T02988                                 
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
  KO
K14284  nuclear RNA export factor
Organism
ptg  Panthera tigris altaica (Amur tiger)
Pathway
ptg03008  Ribosome biogenesis in eukaryotes
ptg03013  Nucleocytoplasmic transport
ptg03015  mRNA surveillance pathway
ptg05014  Amyotrophic lateral sclerosis
ptg05164  Influenza A
ptg05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ptg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102965633 (NXF1)
   03015 mRNA surveillance pathway
    102965633 (NXF1)
   03008 Ribosome biogenesis in eukaryotes
    102965633 (NXF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    102965633 (NXF1)
   05168 Herpes simplex virus 1 infection
    102965633 (NXF1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102965633 (NXF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptg03019]
    102965633 (NXF1)
   03009 Ribosome biogenesis [BR:ptg03009]
    102965633 (NXF1)
Messenger RNA biogenesis [BR:ptg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102965633 (NXF1)
   mRNA cycle factors
    Stress granule specific factors
     102965633 (NXF1)
Ribosome biogenesis [BR:ptg03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    102965633 (NXF1)
SSDB
Motif
Pfam: Tap-RNA_bind TAP_C NTF2 LRR_4 LRR_8 LRR_9
Other DBs
NCBI-GeneID: 102965633
NCBI-ProteinID: XP_007092002
Position
Un
AA seq 621 aa
MYFLTDVLLLTPEHDDRVSFPQRRKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDRD
VAMSDAQEVPRVRYIPYAARPNRRGDSWHDRDRIHVTVRRDRALPERGGAGTSQDGTSKN
WFKITIPYGRKYDKSWLLSVIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYK
ILDQENRRISIIINSSVPPHSAQNELKPEQVEQLKVIMSKRYDGSQQALDLKGLRSDPDL
VAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSLVQKAPNLKILNL
SGNELKSERELDKVKGLKLEELWLDGNPLCDTFRDQSTYISAIRERFPKLLRLDGHELPP
PIAFDVEAPTTLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSL
SIPFTPQNPSRSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNS
FVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRN
ASPDEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTR
SAQAFTHLKAKGEIPEVAFMK
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgtactttctaactgatgttctgcttttaaccccagagcacgatgaccgtgttagtttc
cctcaaagaagaaagaagggccggggtcccttccggtggaaatatggtgaggggaaccgt
aggtctggaagaggaggttctggcattcggtcttcccgcctggaggaagatgacagagat
gtagcgatgagtgatgcccaggaggttccccgagtacgatacatcccctatgctgcccga
cccaaccgtcgaggtgacagttggcatgatcgagaccgcattcatgttaccgtgcggaga
gacagagctcttccagagagaggaggggctggcaccagccaggacgggacctcgaagaac
tggtttaagattacaattccttatggcagaaaatatgacaagtcatggctcctgagtgtg
attcagagcaagtgcagtgtccctttcacccccatcgagtttcactatgaaaacacacgg
gcccagttttttgttgaggatgccagtaccgcctctgctttgaaggccgtcaactataag
attttggatcaggagaaccgaaggatctctatcatcatcaattcttctgtcccaccccat
tctgcacagaacgagctgaagccggaacaagtggagcagctaaaggtgatcatgagcaaa
cgatatgatggctcccaacaagcgcttgacctgaagggcctccgttcagacccagacttg
gtggcccagaacattgacgttgtcctgaatcgcaggagctgcatggcggccaccctgcgg
atcatcgaggagaacatccccgagctgttgtccttgaacttgagcaacaacaggctgtac
aggctggatgacatgtccagcctggtgcagaaagcacccaacctgaagatcctcaacctc
tccggaaacgagttgaagtccgagagggagttggacaaggtaaaagggctgaagctggaa
gagctgtggctcgacggaaacccgctgtgtgacaccttccgagaccagtccacctacatc
agcgccattcgcgaacgatttcccaaattattacgcctggatggccatgagttaccccct
ccgattgcctttgacgttgaagcccccacgacgttaccgccctgcaagggaagctatttt
ggaacagagaccctgaagaacctggtcctgcatttcttgcagcagtactacgcggtgtat
gactctggagaccggcagcggctcctggacgcctaccatgacggggcctgctgctccctc
agcattccttttaccccccagaacccttcccgaagcaacctggccgagtacttcaaggac
agcaggaatgtgaagaagctcaaagaccccaccctgcggttccgcctgctgaagcacacg
cgtctcaacgttgttgccttcctcaatgagttgcccaaaactcagcacgacgtcaactcc
tttgtggtagacataagcgcccagacaagcacgttgctgtgtttttccgtcaacggggtc
ttcaaggaagtggatggaaaatctcgggattctttgcgagccttcactaggacatttgtc
gctgttcctgccagcaattcagggctgtgcatcgtaaatgacgagctgtttgtgcgcaat
gccagccctgatgagatccagagagccttcgccatgcctgcacccacaccttcctccagc
ccagtgcccaccctctccccagagcagcaggagatgctgcaggcattctctacccagtct
ggcatgaaccttgagtggtcccagaagtgcctccaggacaacaactgggactacaccaga
tctgcccaggcctttactcatctgaaggccaagggcgagatcccagaagtggcgttcatg
aagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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