KEGG   Phaeodactylum tricornutum: PHATRDRAFT_13855
Entry
PHATRDRAFT_13855  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
pti  Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:pti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pti03009]
    PHATRDRAFT_13855
Enzymes [BR:pti01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     PHATRDRAFT_13855
Ribosome biogenesis [BR:pti03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PHATRDRAFT_13855
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-GeneID: 7202389
NCBI-ProteinID: XP_002181690
JGI: 13855
UniProt: B7G3Y8
Position
13:complement(281276..281968)
AA seq 217 aa
SRREADKLIEAGRVSVNDIPVKSKGGFKVVPFHDKITLDGIPVTGTSDATINFDYVKYWK
PVGVTCTTDRKIAGNIIDALEEAGFDSSKRIFPVGRLDKETSGLILLTSDGRVPNAVLRG
RHKQPKIYQVWVDRPVLAKDVAQLRDGVIITTVAQRDGNRAEPLTARTKSCAVQVLGREK
LQLTLVEGRNRQIRKMLGALNYTVKRLHRVQFMELTL
NT seq 651 nt   +upstreamnt  +downstreamnt
tcccgcagagaggctgacaaattgattgaggctggccgtgtgagcgtgaatgacatccct
gtaaaaagcaaggggggtttcaaagtcgttccctttcatgacaagataactcttgacggt
atacccgtaacaggaacgtctgacgcaacgataaattttgattatgtgaagtactggaag
cctgtgggcgtcacctgcacgacggatcggaaaatagctggaaatatcattgatgctctc
gaagaagccggctttgattcatccaagcgtatatttccggtgggccggctcgacaaagaa
acgtccggtttaatactgttgactagtgatgggcgtgttccgaatgcggttcttcgaggt
cggcacaagcaacccaaaatttaccaagtgtgggtagatcgaccagtgctagcgaaagat
gttgctcaattacgggacggggtcatcattacgactgtcgcgcaacgggacggcaatcgt
gcagagccgctcacagctcgaacaaaatcatgtgcagttcaagttttgggaagagaaaaa
ttgcaactgacactagtggaaggtcgcaatcgacaaattcgaaaaatgttgggtgctctc
aactacactgtcaagaggcttcaccgagtgcagttcatggaattgaccctg

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (62)   

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