KEGG   Phaeodactylum tricornutum: PHATRDRAFT_54956
Entry
PHATRDRAFT_54956  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K14525  ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PHATRDRAFT_54956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pti03009]
    PHATRDRAFT_54956
   03016 Transfer RNA biogenesis [BR:pti03016]
    PHATRDRAFT_54956
   03029 Mitochondrial biogenesis [BR:pti03029]
    PHATRDRAFT_54956
Enzymes [BR:pti01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     PHATRDRAFT_54956
Ribosome biogenesis [BR:pti03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     PHATRDRAFT_54956
Transfer RNA biogenesis [BR:pti03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    PHATRDRAFT_54956
Mitochondrial biogenesis [BR:pti03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    PHATRDRAFT_54956
SSDB
Motif
Pfam: Alba Rpp20
Other DBs
NCBI-GeneID: 7195134
NCBI-ProteinID: XP_002183482
JGI: 54956
UniProt: B7G8J5
Position
19:complement(402160..403054)
AA seq 167 aa
MEKYRLIQESKADEHDLAHGANAASSMLEFPEVRITQQGKPRNYISYAMNLFSDGSPTIV
LKAMGKAINKAVTIAEILKRKMFLHQINSLSSVEMIDVYEPVEEGLDLVTNRRFVSCMKI
ILSLERLDSSHSGYQTPLAREEMHPGDYHPTVGSSKTSATPMISSNG
NT seq 504 nt   +upstreamnt  +downstreamnt
atggaaaagtaccggctgatccaggaaagcaaggcggatgaacacgatttggcccatggc
gcgaatgctgcctcgtcaatgctcgaatttccagaagtccgcatcacgcagcaaggaaag
ccacgtaactacatatcgtacgccatgaatttgttttcggacggctcgccaacaattgtg
ctcaaagcaatgggaaaggccatcaacaaggcagtaacgatcgcagaaattcttaaacgc
aaaatgtttctgcaccagatcaacagtttgagttccgtcgaaatgattgatgtatacgag
ccggtcgaagaaggtttggacttggtcactaaccgtcgctttgtatcgtgcatgaaaatc
atcctttccttggaacgactcgacagttctcattctggctatcaaacacccctggctcgg
gaggagatgcatcctggagattatcatccgaccgttggttcgagcaaaacatccgctaca
ccaatgatttcatcaaatggatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (50)   

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