KEGG   Parageobacillus thermoglucosidasius DSM 2542: AOT13_17255
Entry
AOT13_17255       CDS       T04476                                 
Name
(GenBank) hypothetical protein
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ptl  Parageobacillus thermoglucosidasius DSM 2542
Pathway
ptl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ptl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AOT13_17255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptl03400]
    AOT13_17255
Enzymes [BR:ptl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AOT13_17255
DNA repair and recombination proteins [BR:ptl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AOT13_17255
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_4 SH3_13 UvrD_C_2 AAA_11 Viral_helicase1 UvrD-helicase HHH_5 AAA_22 AAA_16 AAA_12 T2SSE UvrD_C AAA AAA_28 NTPase_1 AAA_18 nSTAND3 AAA_23
Other DBs
NCBI-ProteinID: ALF11624
Position
complement(3493410..3495764)
AA seq 784 aa
MQQPESFVFEGTSFIKGSYISTIFHNEANLYSVVRVRVEETNEAYDEQEVVVTGYFPKMN
EHDTYIFYGKFHDHPKFGRQYVVDHFRKQFPNTKDGIIHYLSSDLFKGIGKKTAKAIVEA
LGENAISKILADPSVLDDVPKLSKQRAKELYDTLRAHEGLEQTMIALSQFGFGPQLSMKI
YQVYQDETLSVIQQNPYQLVEDVEGIGFGRADELGYRLGISGSHPARIRAACLFVIERDC
LQEGHVYVTERQLVTNIKQLLEAKRKETVSEEAIEQMLLMLSEEGKLIKEDEKFYIPSLY
FAEKGIVTNVKRLLQQTEAVMTFPESEFLLALGRLEERLSVQYAPTQKEAIRQALSSPLF
ILTGGPGTGKTTVIKGIVEIFADLHGFSLDPKDYTKDDPFPILLAAPTGRAAKRMSEATG
LPAVTIHRLLGWNGAEGFTHDEDEPISGKLLIVDEMSMVDTWLANQLFKSIPDGMQVILV
GDEDQLPSVGPGQVLKDLLQAGVIPTVRLTEVYRQAEGSSIIELAHQMKNGGLPPDLTAP
KADRSFIRCQTSQVAEVVRQIADNARRKGFAVKDIQVLAPMYRGPAGIDRLNQVLQDLFN
PKSEKKRELSVGDVIYRVGDKVLQLVNQPDDNVFNGDIGEIVAIFYAKENTEKQDLVVVS
FDGIEVTYSRQDLSQITHAYCCSIHKSQGSEFPIVILPVVKSYYRMLKRNLLYTAVTRSK
QFLIICGEEEAFKLGVARSDDSSRQTTLTEKLQKILVPAVEGELPMEDANIGMENVSPYD
FMDE
NT seq 2355 nt   +upstreamnt  +downstreamnt
ttgcagcaaccggaatcatttgttttcgagggaacttcgtttataaaaggttcatatatt
tccaccatttttcataatgaagcgaatttgtattccgtcgttcgcgtccgggtcgaagaa
acgaacgaagcgtacgatgaacaagaagttgtggtgaccggatatttccctaaaatgaac
gagcatgacacgtatattttttacgggaaatttcatgaccatccaaagttcggccggcaa
tatgttgtcgaccatttccgcaaacaattccctaacacgaaagacggcatcattcactat
ttatccagcgatttatttaaaggaatcgggaaaaaaacggcaaaagcgatcgtcgaagcg
cttggcgaaaatgccatttccaaaattttagcggatccaagcgtgttggatgatgttcca
aaattgtcaaagcaaagggcaaaagagctgtatgatacgctgcgtgcccatgaagggctg
gaacagacgatgatcgcgctttcccagtttggttttggcccgcaattgtcgatgaaaatt
tatcaagtataccaagatgaaacactctccgttattcagcaaaacccctaccagcttgtc
gaagatgtcgaaggaatcggctttggccgcgccgacgaattaggctaccggcttggcatt
tccggcagccatcctgcgcgcattcgcgcggcgtgtttgtttgtgatagaacgggattgc
cttcaagaagggcatgtgtatgtgacagaaaggcagcttgtcacaaacattaaacagctt
ttggaagcaaaacgaaaagaaacagtcagtgaagaagcgatcgagcaaatgttgttaatg
ctttctgaagaaggaaagctaatcaaggaagatgaaaaattttatattccgtcgctttat
tttgctgaaaaaggaattgtgacaaatgtgaagcgccttttacagcaaacggaagcagtg
atgacgtttccggaatcggaatttttgctagcgctcggaaggcttgaggagcgtttatcc
gttcaatatgctcccacgcaaaaagaagcgattcgacaagcgctttcttccccgctgttt
attttgaccggaggccccggcacaggaaaaacgacagtcattaaagggattgtggaaatt
ttcgctgatttgcacggtttttccctcgatccgaaagattatacgaaagatgatccattt
ccgattttgctcgccgcgccgacgggaagggcggcaaaaagaatgagcgaagcgacgggt
ttgcctgcggtgacgattcaccgtttgcttggatggaatggggcggaaggttttacccat
gacgaggacgagccgattagcggcaaacttttaatcgttgatgaaatgtcgatggtcgat
acgtggctggccaatcagctgtttaagtcgattccggacggcatgcaagtgatccttgtc
ggggatgaagatcagctgccatctgtcggaccgggacaagtgttaaaggatttattgcaa
gcgggtgtcatcccgaccgttcgactaaccgaagtgtaccggcaagcggagggctcatcg
attatcgaattggcgcaccaaatgaaaaacgggggccttcctccagacttaactgctcca
aaggcagaccgctcattcattcgctgccagacttcacaagttgctgaagttgtccggcaa
attgccgacaacgcgcgcagaaaaggcttcgcagtgaaagacattcaagtgcttgccccg
atgtatcgcggccctgccgggatcgaccgcctcaatcaagtgctgcaagatttgtttaat
ccgaaatctgagaaaaagcgggaactttcggttggcgatgtcatatatcgggttggtgat
aaggtgctgcagcttgtcaaccaacctgatgacaatgtgtttaatggggacattggggaa
attgtcgcgattttttacgcgaaagaaaatacggagaagcaagatttagttgtcgtttct
tttgacggcatcgaggtgacatattcgcggcaagatttgtcgcaaattacgcatgcatat
tgctgttccattcataaatcgcaaggaagcgaatttccaattgtcattttgccggttgtg
aaaagctattatcgcatgttaaagcggaatttattatatacggccgtgacaaggagcaaa
caatttttaattatatgcggcgaagaagaggcgtttaaattaggggttgcccgcagtgat
gatagctcccggcaaacaacgctgacggaaaaattgcaaaaaattcttgtccctgctgtt
gaaggggagctgccgatggaagacgcgaacatcggaatggaaaacgtttcaccgtatgac
tttatggacgagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (29)   

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