KEGG   Pseudoalteromonas translucida KMM 520: PTRA_a1806
Entry
PTRA_a1806        CDS       T04220                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ptn  Pseudoalteromonas translucida KMM 520
Pathway
ptn03030  DNA replication
ptn03430  Mismatch repair
ptn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ptn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PTRA_a1806 (dnaQ)
   03430 Mismatch repair
    PTRA_a1806 (dnaQ)
   03440 Homologous recombination
    PTRA_a1806 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptn03032]
    PTRA_a1806 (dnaQ)
   03400 DNA repair and recombination proteins [BR:ptn03400]
    PTRA_a1806 (dnaQ)
Enzymes [BR:ptn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PTRA_a1806 (dnaQ)
DNA replication proteins [BR:ptn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PTRA_a1806 (dnaQ)
DNA repair and recombination proteins [BR:ptn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PTRA_a1806 (dnaQ)
SSDB
Motif
Pfam: RNase_T CAF1 RNase_H_2 DUF6151
Other DBs
NCBI-ProteinID: ALS32966
UniProt: A0A0U2LMU1
Position
I:1656571..1657281
AA seq 236 aa
MSKQKQAIVDWSLRYQQLANGSESALLQQFYASAFNQPGAAIADVPFVAMDFETTGLDSE
ADDIVSVGLVPFNLQRIYCKHSRHWVVQPRRNLHEESIIIHGITHSEVDDAPDFNRIIEP
LLAALSGKVVVVHYAAIERPFLNNALLLRLHEGIEFALVDTMDIEKRALTARQGLIGRLF
NSKIGSLRLNDCRKRYSLPAYNNHNALTDALATAELLQAQLSHHYRLDTPIDDLWV
NT seq 711 nt   +upstreamnt  +downstreamnt
atgagcaagcaaaagcaagcaatagttgactggtcgcttaggtatcagcaattagcaaat
ggcagtgaaagtgcattgttacagcagttttatgcatcggcttttaatcagcctggtgca
gcaatagctgatgtgccatttgtagcaatggactttgaaaccaccggcttagatagcgaa
gcagatgacatagtgagtgtgggtttagtgccttttaacttacagcgaatatactgcaag
cacagccgccattgggtagtacaaccgcgcagaaacttacatgaagaatctataatcatt
catggtattacgcactcagaggttgatgatgcaccagactttaatcgtattattgagcca
ttgcttgccgcgctaagcggtaaagtagtggtggtacattatgcagcaatagagcggcca
tttttaaataatgcgttgctacttaggctgcacgaaggcatagagtttgcgttagttgat
actatggatattgagaaaagagcattaacagcacgtcagggtttaatagggcggctattt
aactctaaaataggctcgttgcgattaaacgattgtcgtaagcgctactcactccctgcg
tataataatcataatgccttaacagatgcattggccacagctgagttgttacaagcgcag
ctgagtcatcattatcgcttagatacgccgatagatgatttgtgggtataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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