KEGG   Planktomarina temperata: RCA23_c25050
Entry
RCA23_c25050      CDS       T03229                                 
Name
(GenBank) putative D-Ala-D-Ala carboxypeptidase 3 (S13) family protein
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
ptp  Planktomarina temperata
Pathway
ptp00550  Peptidoglycan biosynthesis
ptp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RCA23_c25050
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ptp01002]
    RCA23_c25050
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ptp01011]
    RCA23_c25050
Enzymes [BR:ptp01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     RCA23_c25050
Peptidases and inhibitors [BR:ptp01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   RCA23_c25050
Peptidoglycan biosynthesis and degradation proteins [BR:ptp01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   RCA23_c25050
SSDB
Motif
Pfam: Peptidase_S13 Peptidase_S11
Other DBs
NCBI-ProteinID: AII88024
Position
complement(2650876..2652333)
AA seq 485 aa
MKKTLTRRAALSTALAALGTSAFAGAPLKSLRPIARPDASPMLLGGAAAVIRSFSLTGQV
SCALMDPETGVLLDAYSPEAELPPASVTKALTAAYGLQKLGRDFQFVTRLSLQGRVRHGA
FVGDVILTGSADPTLHTDDLVKFAKALQKTGIQRVKGRLLIVDNGFPYLREIDSSQLPQA
NYNPAIAGVNLNLNRVQFEWARQASGGYDLSMSAPGRIYRPQIPSIGMRVEERDAPSYAY
QYATEREEWSVQRSALGKDGGRWLPARNPRRYAGEAFRVICAEMGIELPPPTIVEGQHPD
AVMAVDIAQKNSRPYHEIAKSMLKLSTNLTAEVIGLTASGAPNLRQSAAALSQFAQAHGM
RGAVVDHSGLSDQSRLTAGGLAMFMAWHHRNGLADLLKPKILRHKGKPMAGVDLRVKTGT
LNFVSTLSGYLTYEGKSLGFAILTADMARREKVKGTENPRGAKGWEARSRSLQYALLRDW
PGHLR
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgaaaaaaactctcacacgcagagcagcgcttagcacggcccttgcggcgcttggcact
tcagcctttgctggggcgcccttgaagtctttgcggcccatcgcaaggccggatgcatcg
cccatgctcttgggtggcgcggcggccgttattcgctcgttttcgctcacaggtcaggtc
agctgcgcgcttatggatccggaaacgggggtgcttctcgacgcctattcaccggaggct
gaattgcctccggccagtgtgaccaaagcactgaccgccgcctatggtttgcaaaaactt
gggcgtgattttcaattcgtcacgcgtttaagtctgcaaggacgggtgagacatggggcg
tttgtcggggatgtcattttgactggatctgcggatccaactttacacacagatgatttg
gtcaagtttgccaaggccctgcagaaaacaggaattcagcgggttaaaggccggcttttg
attgtggacaatggttttccctacctgcgtgaaatcgacagcagccaattgccgcaagcc
aattacaacccggcgattgccggggtgaatctcaacctcaaccgggtgcaatttgaatgg
gcccgccaggccagcggcggctatgatctgtccatgagcgcgccggggcgaatttatcgg
ccgcagatcccctcgattgggatgcgtgttgaggagcgggacgcgccgagctatgcctat
caatacgcaaccgaacgcgaggaatggtccgtgcagcgctctgccttgggcaaggatggg
gggcggtggttgcccgcgcgcaatccaagacgctatgccggggaggcttttcgggtgata
tgcgcagagatgggcattgaactgccacctcccactatcgtcgaggggcagcacccggat
gcggtgatggcggtggatatcgcgcaaaagaactcgcgcccctatcatgaaatcgccaaa
tcgatgttgaaattgtcgacgaatttgacggctgaggtgatcggcctcacagcctcaggc
gcgccaaacctgcgccaatcggcagcggctctgagccaatttgcgcaggcccatgggatg
cgtggtgcggttgtcgaccactcgggtctgtcggatcaatcgcggctcaccgccggtggg
ctggccatgttcatggcctggcaccatcgcaacgggctagccgatttgctcaagcccaag
atcttgcgccacaaaggaaagcctatggcgggtgtggatctgcgggttaaaacaggcacg
ttgaattttgtaagcacgctgtcgggatatctcacatatgaaggcaaaagccttggattt
gctattttgaccgctgatatggcgcggcgtgaaaaagtgaaaggcactgaaaatccacgc
ggggccaagggatgggaggcgcgatcgcgtagcttgcaatatgcgcttttgcgcgattgg
ccggggcatttacgttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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