KEGG   Pan troglodytes (chimpanzee): 100614945
Entry
100614945         CDS       T01005                                 
Symbol
SLC6A13
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X2
  KO
K05046  solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr04721  Synaptic vesicle cycle
ptr04727  GABAergic synapse
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    100614945 (SLC6A13)
   04721 Synaptic vesicle cycle
    100614945 (SLC6A13)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ptr02000]
    100614945 (SLC6A13)
Transporters [BR:ptr02000]
 Solute carrier family (SLC)
  SLC6: Sodium- and chloride-dependent neurotransmitter transporter
   100614945 (SLC6A13)
SSDB
Motif
Pfam: SNF
Other DBs
NCBI-GeneID: 100614945
NCBI-ProteinID: XP_003313472
Ensembl: ENSPTRG00000004506
VGNC: 8547
UniProt: H2Q562 A0A6D2YB14
Position
12:complement(286843..352219)
AA seq 602 aa
MDSRVSGTTSNGETKPVYPVMEKKEEDGTLERGHWNNKMEFVLSVAGEIIGLGNVWRFPY
LCYKNGGGAFFIPYLVFLFTCGIPVFLLETALGQYTSQGGVTAWRKICPIFEGIGYASQM
IVILLNVYYIIVLAWALFYLFSSFTIDLPWGGCYHEWNTEHCMEFQKTNGSLNGTSENAT
SPVIEFWERRVLKISDGIQHLGALRWELALCLLLAWVICYFCIWKGVKSTGKVVYFTATF
PYLMLVVLLIRGVTLPGAAQGIQFYLYPNLTRLWDPQVWMDAGTQIFFSFAICLGCLTAL
GSYNKYHNNCYRDCIALCFLNSGTSFVAGFAIFSILGFMSQEQGVPISEVAESGPGLAFI
AYPRAVVMLPFSPLWACCFFFMVVLLGLDSQFVCVESLVTALVDMYPHVFRKKNRREALI
LGVSVVSFLVGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFESLCVAWVYGARRFYDNI
EDMIGYRPWPLIKYCWLFLTPAVCTATFLFSLIKYTPLTYNKKYTYPWWGDALGWLLALS
SMVCIPAWSLYRLGTLKGPFRERIRQLMCPAEDLPQRNPAGPSAPATPRTSLLRLTELES
HC
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggatagcagggtctcaggcacaaccagtaatggagagacaaaaccagtgtatccagtc
atggaaaagaaggaggaagatggcaccctggagcgggggcactggaacaacaagatggag
tttgtgctgtcagtggctggggagatcattggcttaggcaacgtctggaggtttccctat
ctctgctacaaaaatgggggaggtgccttcttcatcccctacctcgtcttcctctttacc
tgtggcattcctgtcttccttctggagacagcactaggccagtacactagccagggaggc
gtcacagcctggaggaagatctgccccatctttgagggcattggctatgcctcccagatg
atcgtcatcctcctcaacgtctactacatcattgtgttggcctgggccctgttctacctc
ttcagcagcttcaccatcgacctgccctggggcggctgctaccatgagtggaacacagaa
cactgtatggagttccagaagaccaacggctccctgaatggtacctctgagaatgccacc
tctcctgtcatcgagttctgggagcggcgggtcttgaagatctctgatgggatccagcac
ctgggggccctgcgctgggagctggctctgtgcctcctgctggcctgggtcatctgctac
ttctgcatctggaagggggtgaagtccacaggcaaggtggtgtacttcacagccacattt
ccttacctcatgctggtggtcctgttaattcgaggggtgacattgcctggggcagcccaa
ggaattcagttttacctgtacccaaacctcacgcgtctgtgggatccccaggtgtggatg
gatgcaggcacccagatattcttctccttcgccatctgtcttgggtgcctgacagccctg
ggcagctacaacaagtaccacaacaactgctacagggactgcatcgccctctgcttcctc
aacagcggcaccagctttgtggccggctttgccatcttctccatcctgggcttcatgtct
caggagcagggggtgcccatttctgaggtggccgagtcaggccctggcctggctttcatc
gcttacccgcgggctgtggtgatgctgcccttctctcctctctgggcctgctgtttcttc
ttcatggtcgttctcctgggactggatagccagtttgtgtgtgtagaaagcctggtgaca
gcgctggtggacatgtaccctcacgtgttccgcaagaagaaccggagggaagccctcatc
cttggagtatctgtcgtctccttccttgtggggctgatcatgctcacagagggcggaatg
tacgtgttccagctctttgactactatgcggccagtggcatgtgcctcctgttcgtggcc
atcttcgagtccctctgtgtggcttgggtttacggagccaggcgcttctacgacaacatc
gaagacatgattgggtacaggccatggcctcttatcaaatactgttggctcttcctcaca
ccagctgtgtgcacagccaccttcctcttctccctgatcaagtacactccgctgacctac
aacaagaagtacacgtacccgtggtggggcgatgccctgggctggctcctggctctgtcc
tccatggtctgcattcctgcctggagcctctacagactcggaaccctcaagggccccttc
agagagagaatccgtcagctcatgtgcccagccgaggacctgccccagcggaacccagca
ggaccctcggctcccgccacccccaggacctcactgctcagactcacagagctagagtct
cactgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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