KEGG   Pan troglodytes (chimpanzee): 450489
Entry
450489            CDS       T01005                                 
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
  KO
K11449  jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    450489 (JMJD1C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptr03036]
    450489 (JMJD1C)
Chromosome and associated proteins [BR:ptr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    450489 (JMJD1C)
SSDB
Motif
Pfam: JmjC C1_2 zf-C5HC2 FYVE
Other DBs
NCBI-GeneID: 450489
NCBI-ProteinID: XP_001166726
Ensembl: ENSPTRG00000002540
VGNC: 4718
UniProt: H2Q1Y6 A0A6D2XQG5
Position
10:complement(58951892..59306380)
AA seq 2358 aa
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRANQNVNAVHSHYTRAQANSPRPAMNSQAAVPKQNTHQ
QQQQRSIRPNKRKGSDSSIPDEEKMKEEKYDYISRGENPKGKNKHLMNKRRKPEEDEKKL
NMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQKPENELKNKNTSKINGEEGKPHNNEKA
GEETLKDSQPPWDQIQEDKKHEEAEKRKSVDTQLQEDMIIHSSEQSTVSDHNSNDLLPQE
CNMDKTHTMELLPKEKFVSRPPTPKCVIDITNDTNLEKVAQENSSTFGLQTLQKMDPNVS
DSKHSIANAKFLETAKQDSDQSWVSDVVKVDLTQSGVTNASSGNDHLNMEKEKYVSYISP
LSAVSVMEDKLHKRSPPPETIKSKLNTSVDTHKIKSSPSPEVVKPKITHSPDSVKSKATY
VNSQATGERRLANKIEHELSRCSFHPIPTRSSTLETTKSPLIIDKNEHFTVYRDPALIGS
ETGANHISPFLSQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPLPTINTHPL
TSGPHHAVHHPHLLPTVLPGVPTASLLGGHPRLESAHASSLSHLALAHQQQQQLLQHQSP
HLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAEASLRRNSPS
PWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKITAHSSPPLTKTLVDHHKEELERKA
FMEPLRSVASTSAKNDLDLNRSQTGKDCHLHRHFVDPVLNQLQRPPQETGERLNKYKEEH
RRILQESIDVAPFTTKIKGVEGERENYSRVASSSSSPKSHIIKQDMDVERSVSDLYKMKH
SVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYGDKQSNALAAAAANPQTLTSFITS
LSKPPPLIKHQPESEGLVGKIPEHLPHQIASHSVTTFRNDCRSPTHLTVSSTNTLRSMPA
LHRAPVFHPPIHHSLERKEGSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDSQA
NFKSSSEQSLTEMWRPNNNLSKEKTEWHVEKSSGKLQAAMASVIVRPSSSTKTDSMPAMQ
LASKDRVSERSSAGAHKTDCLKLAEAGETGRIILPNVNSDSVHTKSEKNFQAVSQGSVPS
SVMSAVNTMCNTKTDVITSAADTTSVSSWGGSEVISSLSNTILASTSSECVSSKSVSQPV
AQKQECKVSTTAPVTLASSKTGSVVQPSSGFSGTTDFIHLKKHKAALAAAQYKSSNASET
EPNAIKNQTLSASLPLDSTVICSTINKANSVGNGQASQTSQPNYHTKLKKAWLTRHSEED
KNTNKMENSGNSVSEIIKPCSVNLIASTSSDIQNSVDSKIIVDKYVKDDKVNRRKAKRTY
ESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEIEEDLKPNGVLSRSAKERS
KLKLQSNSNTGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSKKG
EEPAHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENFEDDELDIETS
KYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQK
CGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHT
LREKYGIKSHCHCTNKQNLQVGNFPTMNGVSQVLQNVLNHSNKISLCMPESQQQNTPPKS
EKNGGSSPESDVGTDNKLTPPESQSPLHWLADLAEQKAREEKKENKELTLENQIKEEREQ
DNSESPNGRTSPLVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGAPSSKSG
RTMPNILDDIIASVVENKIPPSKTSKINVKPELKEEPEESIISAVDENNKLYSDIPHSWI
CEKHILWLKDYKNSSNWKLFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQADL
LNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLL
KSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDV
VNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKI
REFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPA
GALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLLKEEINYDDKLQVKNILYHAVKE
MVRALKIHEDEVEDMEEN
NT seq 7077 nt   +upstreamnt  +downstreamnt
atgcaaggtccttattccttaaatggatacagagtgagagtatatagacaagactctgcc
acccagtggtttactggcataattactcatcatgatctcttcacccgcaccatgatcgtt
atgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatgaccttt
ctagatgatgttgttcactctttgttaaaaggtgaaaatattggcattacatcacgacgc
aggtctcgtgccaatcaaaacgtcaacgctgttcacagccattatacacgtgcccaagca
aatagtcccagaccagcaatgaactcccaagctgctgtaccaaaacagaatacacaccag
caacagcaacaaagaagtatccgtccaaataagaggaagggctcagatagcagtatacca
gatgaagagaagatgaaggaggaaaaatatgattatatatcacgaggagaaaatcctaaa
ggtaaaaacaaacacttgatgaataaaagaaggaaacctgaggaggatgaaaagaaacta
aatatgaaaagacttcgaactgacaatgtttcagacttttctgagagcagtgactcagaa
aattcaaataagagaataatagataattcctcagaacagaagccagagaatgaattgaaa
aataaaaatacttcaaaaataaatggagaagaaggaaaaccccataataatgagaaggca
ggagaagagaccctaaaagatagccagcctccctgggatcaaatacaggaagataaaaaa
catgaagaagcagagaagcggaagtctgttgacactcagcttcaagaagatatgattatt
cattcgtcagaacaatccacagtttctgatcataattctaatgatttacttcctcaggaa
tgcaatatggataaaacacataccatggaattgctaccaaaggagaagtttgtatccaga
ccacccacaccaaaatgtgttattgatattacaaatgacactaatttagaaaaggtggct
caggaaaactcaagtacctttggccttcagacacttcagaaaatggatcctaatgttagt
gattcaaaacactctattgcaaatgcaaaattcttggaaacagcaaaacaagattctgac
cagagctgggtcagtgatgtagttaaagtggatctaacccaatcaggtgttacaaatgct
tcttcaggaaatgatcacttgaacatggaaaaagagaagtatgtctcttacatttctcct
ttaagtgcagtttctgtcatggaagataagctgcataagcgaagtccacctccagagact
ataaaatctaaacttaatacttcagtagatactcacaagataaaatccagcccatcacct
gaagttgttaaacccaaaataactcattctcctgattctgtaaagtctaaggccacttat
gtgaacagccaagctactggtgaaagaagactggcaaataagatagaacatgagctatca
agatgcagttttcatccaattcctactcgaagcagtacattagaaactacaaagagtcct
cttatcattgataaaaatgagcattttacagtttacagagatcctgcacttattgggtca
gaaacaggagctaatcatatttcacctttcctaagccagcatccttttcctcttcactcc
tcatctcatagaacctgtttaaatccaggtacccatcatcctgccttaactcctgcaccc
catttactagccggatcatctagtcaaactccattacctaccattaacactcatcctctg
actagtggtccacaccatgctgttcatcaccctcatttacttcccactgtgttacctgga
gtgcctactgcctccttacttggtggccacccacgactagagagtgctcatgccagcagc
ttgagccacttagcgctagcacaccagcaacaacaacagttgttacagcaccagtcacct
catcttcttggacaagcccatccttctgcttcatataatcagcttggactttatccaatt
atttggcagtatccaaatggaacacatgcatactcaggacttggtttgccttcttctaag
tgggttcacccagaaaatgcagttaatgctgaagcttcgttaaggaggaattctcccagt
ccttggctacatcagcccacccctgtgacctcagcagatggtattggattacttagccac
attcctgtcagaccttccagtgcagagcctcatcggcctcttaaaattacagcccattcc
agtccaccattgacaaaaactttagtagatcatcataaggaagaattagaaagaaaagct
tttatggaaccattacggtctgttgcatccacatcagccaaaaatgacctggatctaaat
aggtcacagactggaaaagattgtcacttacataggcattttgtggatccagtattaaat
caattacagaggccaccccaggagactggagagaggttaaacaaatacaaagaggaacac
cgtcgaattcttcaagaaagtattgatgttgctccctttacaactaaaatcaagggagtt
gagggtgagagagagaattattccagagtggcatcatcatcttccagtcctaaaagccat
atcatcaaacaagatatggatgtagaacgctcagtatcagatctttataaaatgaagcac
tcagtgcctcagagtttaccccaaagtaactatttcactacattgtctaatagtgtggtc
aatgaaccaccaagatcatacccatccaaagaagtttcaaatatttacggtgataaacag
agtaatgcccttgcagcggcagcagctaatcctcaaactctgacttcatttataacatct
ctttcaaagcctccacctttgattaaacaccaaccagaaagtgaaggtttagtaggcaag
ataccagaacatcttccacatcagattgcatctcactcagtaacaaccttcagaaatgat
tgtaggagtcctacccatttgacagtttcttctacaaatacactccgcagtatgcctgca
ttacatagagcaccagtatttcacccaccaatccatcacagcctggaaagaaaggaaggc
agctatagtagtctttcccctccaactttaactccggtgatgccagtaaatgctggtggt
aaagttcaagaatcacagaagcctccaactctaatacccgaaccaaaagactcccaggca
aattttaagagttcttcagaacagagtttgacggagatgtggagacctaataataacctc
agcaaagagaaaactgaatggcatgtggagaaaagcagcggaaagttacaggctgctatg
gcatctgtcattgtgcgtccatcttctagtacaaaaactgatagtatgccagcaatgcag
ttagcttctaaagatcgagttagtgaaagatcttcagctggggcacataaaacagattgc
ctcaaactagcagaagccggagaaactggaagaatcattttgccaaatgtgaattcagac
agtgttcacacaaaatctgaaaaaaactttcaggctgtctcacagggcagtgttcccagt
tcagtcatgtctgctgtaaatacgatgtgtaataccaaaacggatgtaatcacatctgct
gccgatactaccagtgtttccagctggggtggttcagaagtaatttcctctttatcaaat
accattttggcctctacatcatcagaatgtgtatcttcaaaaagtgtcagtcagccagtg
gctcaaaaacaagaatgcaaggtcagcaccacagcaccagttacattggccagtagtaag
acaggaagtgttgttcaacccagttctgggttctcaggcacaactgattttatccattta
aaaaagcacaaggcagcattggctgcagctcagtataaaagtagtaatgccagtgagact
gaacctaatgctataaaaaatcagacactttcagcctcccttcctctggatagcactgta
atctgtagtacaattaacaaagcaaactctgtaggaaatgggcaagcttcccagacaagt
caaccaaactaccatactaaactgaaaaaggcctggctcaccagacactcagaagaagat
aaaaatactaataaaatggaaaattcagggaattctgtatcagaaattattaagccatgt
tctgtcaacttaatagcctctacatctagtgatatacaaaatagtgtagatagtaagatc
atagttgataaatatgtaaaagatgataaagtcaacaggagaaaagccaaaagaacttat
gaatctggctctgaaagtggagactcagatgaaagtgaaagcaagtcagagcaaaggact
aaaagacaacctaagccaacttacaaaaagaagcaaaatgatttgcaaaagagaaaaggt
gaaatagaagaagatttgaaacccaatggagttctcagcaggagtgccaaagaaagaagt
aaactgaagttgcaaagcaacagtaatactggcattcctcgttcagtattgaaagattgg
cgtaaagtcaagaagctgaagcaaactggggaatcctttttacaggatgactcctgctgt
gagatagggcctaatttacaaaagtgtcgagaatgtagacttattcgcagtaaaaaagga
gaagaaccagctcactcaccagtattttgtagattttactactttagacggttgtcattt
agtaaaaacggagtagttagaatagatggtttctcttctcctgaccaatatgatgatgaa
gctatgagtttgtggacacatgaaaattttgaagatgatgaactagatatagagacttct
aaatatatcttggatataataggtgataagttctgtcaattagtaacatctgaaaaaaca
gctttgtcctgggtgaaaaaggatgccaaaattgcctggaaaagagcagtgagaggagtc
cgggagatgtgtgatgcatgtgaagcaacattgtttaacattcactgggtctgccaaaaa
tgtggatttgtggtctgcttagattgttacaaggcaaaggaaaggaagagttctagagat
aaagaactatatgcttggatgaagtgtgtgaagggacagcctcatgatcacaaacattta
atgccaacccaaattatacctggttctgttttgacagatcttctagatgccatgcacact
cttagggaaaaatatggtattaaatcccattgtcattgtactaacaaacagaatttacaa
gttggaaattttcctacaatgaatggtgtatctcaagttttacagaatgttcttaatcac
agtaataaaatttctctatgcatgcctgagtctcagcagcaaaatactcctccgaagtct
gagaaaaatggtggcagcagcccagagagtgatgtaggcacagataacaagttaactcct
ccagaatcccagtcaccactgcactggttagcagatcttgcagagcaaaaagccagagag
gaaaaaaaagaaaacaaagaacttacccttgaaaaccaaattaaagaagaaagagaacaa
gacaactctgaatctccaaatggcagaacatcacctcttgtgtcccagaataatgaacaa
ggctcaaccttacgggatttgctgactacaacagctggaaagctacgtgtggggtctaca
gatgctggcattgcctttgccccagtatattcaatgggagccccaagtagcaaaagtgga
cggactatgcctaacattcttgatgacataattgcttcagttgttgaaaacaaaattcca
ccaagtaaaacctccaagataaatgtaaaaccagagcttaaagaagagcctgaagaaagc
ataatatctgcagtggatgaaaataataaattatacagtgatataccacattcttggatc
tgtgagaagcatattttatggcttaaggattataagaatagcagtaattggaagcttttc
aaagaatgttggaaacaaggacagcctgcagtggtttctggtgtgcataagaaaatgaac
attagcctatggaaggcggaatcaattagtcttgattttggagaccaccaagctgatctc
ctgaactgcaaagatagcatcatttcaaatgccaatgttaaggaattctgggatggtttt
gaagaagtttcaaaacggcagaaaaacaagagtggagaaacagttgttttaaaattgaaa
gattggccttcaggagaagacttcaagactatgatgccagcaagatacgaagatctttta
aaaagtctgccattgccagaatattgtaatccagaaggaaaattcaatttggcctctcat
ttgccaggattttttgtacgtcctgatctaggacccaggttgtgcagtgcctatggtgta
gttgctgctaaagatcatgatataggaacaacaaatctccatattgaagtttctgatgtt
gtaaatatactagtttatgttggcatagcaaaaggaaatggcattctctcaaaagcagga
attctcaagaaatttgaggaagaagatttggatgacattttaaggaaaagattgaaggac
tcaagtgaaatacctggtgctctgtggcatatttatgctgggaaagatgttgacaagata
agggaatttcttcaaaagatttcaaaagaacaaggccttgaagttctaccagaacatgat
ccaatacgtgaccaaagttggtatgtgaacaaaaagctccgtcaaaggctgcttgaagaa
tatggagtcagaacctgtactcttattcagttccttggtgatgctattgttttgccagcg
ggagcacttcatcaggttcagaattttcacagctgtattcaggtaactgaagattttgtg
tctccagaacatcttgtagagtcatttcatttaacacaggaactgagacttttgaaggaa
gaaatcaattatgatgataaactacaggttaaaaatattttgtatcatgcagtcaaagaa
atggtgagagccttgaagatacacgaggatgaagtagaggatatggaagaaaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (25)   
   UniProt (2)   
   RefSeq(pep) (23)   
DNA sequence (39)   
   RefSeq(nuc) (25)   
   GenBank (7)   
   EMBL (7)   
Protein domain (4)   
   Pfam (4)   
All databases (78)   

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