KEGG   Pan troglodytes (chimpanzee): 456665
Entry
456665            CDS       T01005                                 
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X2
  KO
K11653  AT-rich interactive domain-containing protein 1
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03082  ATP-dependent chromatin remodeling
ptr04714  Thermogenesis
ptr05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    456665 (ARID1A)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    456665 (ARID1A)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    456665 (ARID1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptr03000]
    456665 (ARID1A)
   03021 Transcription machinery [BR:ptr03021]
    456665 (ARID1A)
   03036 Chromosome and associated proteins [BR:ptr03036]
    456665 (ARID1A)
Transcription factors [BR:ptr03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    456665 (ARID1A)
Transcription machinery [BR:ptr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     456665 (ARID1A)
Chromosome and associated proteins [BR:ptr03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    456665 (ARID1A)
SSDB
Motif
Pfam: BAF250_C ARID
Other DBs
NCBI-GeneID: 456665
NCBI-ProteinID: XP_009449698
Ensembl: ENSPTRG00000000388
VGNC: 6722
Position
1:25372812..25458923
AA seq 2286 aa
MAAQVAPAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEG
PAVGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGAEPDLKNSNGNAGPRPALNNNLTEP
PGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPG
LAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPG
SGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAASGGTPQPTATPTLNQLLT
SPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHA
PMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQ
PYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQ
QQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQST
TQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPP
QELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPG
VSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVP
GNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQ
IHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQ
MHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVA
MHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAG
MAASPEMMGLGDVKLTPAPKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPER
KMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNL
NVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGS
MQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMRSNSVGIQDAFNDGSDSTFQK
RNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYS
RAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSP
SRYPPQQQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGP
PAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATA
TAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQ
GRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSA
PVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPP
VPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSG
LLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDP
GQRTLLDPGRFSKVSSPAPMEGGEEEEELLGPKLEEEEEEEVVENDEEIAFSGKDKPASE
NSEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHF
ESKTELLPSRPHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRS
STLTEDGAKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAK
RCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQ
GVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEA
QDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRK
NPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQ
NPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVL
FLIGQS
NT seq 6861 nt   +upstreamnt  +downstreamnt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccg
ccctcggagctgaagaaagccgagcagcagcagcgggaggaggcggggggcgaggcggcg
gcggcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggc
cccgccgtggggccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaat
gggggtggcggcggcggcggagccggcagcggcggcgggcccggcgcggagccggacctg
aagaactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccg
cccggcggcggcggtggcggcagcagcgatggggtgggggcgcctcctcactcagccgcg
gccgccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgcc
gtcgccgccgccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggc
ctggcagcgctgcagagcggcggcggcgggggcctggagccctacgcggggccccagcag
aactctcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagc
gcctaccccccgcccgccccggcctacgcgctgagctccccgagaggtggcactccgggc
tccggcgcggcggcggctgccggctccaagccgcctccctcctccagcgcctccgcctcc
tcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctcc
gcggccagcgggggaactccccagcccaccgccacccccaccctcaaccaactgctcacg
tcgcccagctcggcccggggctaccagggctaccccgggggcgactacagtggcgggccc
caggacgggggcgccggcaagggcccggcggacatggcctcgcagtgttggggggctgcg
gcggcggcagctgcggcggcggccgcctcgggaggggcccaacaaaggagccaccacgcg
cccatgagccccgggagcagcggcggcggggggcagccgctcgcccggacccctcagcca
tccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggactaatcca
tactcgcagcaacagggacctccgtcaggaccgcagcaaggacatgggtacccagggcag
ccatatgggtcacagaccccgcagcggtacccgatgaccatgcagggccgggcgcagagt
gccatgggcggcctctcttatacacagcagattcctccttatggacaacaaggccccagc
gggtatggtcaacagggccagactccatattacaaccagcaaagtcctcaccctcagcag
cagcagccaccctactcccagcaaccaccgtcccagacccctcatgcccaaccttcgtat
cagcagcagccacagtctcaaccaccacagctccagtcctctcagcctccatactcccag
cagccatcccagcctccacatcagcagtccccggctccatacccctcccagcagtccacg
acacagcagcacccccagagccagcccccctactcacagccacaggctcagtctccttac
cagcagcagcaacctcagcagccagcaccctcgacgctctcccagcaggctgcgtatcct
cagccccagtctcagcagtcccagcaaactgcctattcccagcagcgcttccctccaccg
caggagctatctcaagattcatttgggtctcaggcatcctcagccccctcaatgacctcc
agtaagggagggcaagaagatatgaacctgagccttcagtcaagaccctccagcttgcct
gatctatctggttcaatagatgacctccccatggggacagaaggagctctgagtcctgga
gtgagcacatcagggatttccagcagccaaggagagcagagtaatccagctcagtctcct
ttctctcctcatacctcccctcacctgcctggcatccgaggcccttccccgtcccctgtt
ggctctcctgccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtgcca
ggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatgcatccttcc
atgaaccaatcaagcattgcccaagatcgaggttatatgcagaggaacccccagatgccc
cagtacagttccccccagcccggctcagccttatctccgcgtcagccttccggaggacag
atacacacaggcatgggctcctaccagcagaactccatggggagctatggtccccagggg
ggtcagtatggcccacaaggtggctaccccaggcagccaaactataatgccttgcccaat
gccaactaccccagtgcaggcatggctggaggcataaaccccatgggtgccggaggtcaa
atgcatggacagcctggcatcccaccttatggcacactccctccagggaggatgagtcac
gcctccatgggcaaccggccttatggccctaacatggccaatatgccacctcaggttggg
tcagggatgtgtcccccaccagggggcatgaaccggaaaacccaagaaactgctgtcgcc
atgcatgttgctgccaactctatccaaaacaggccgccaggctaccccaatatgaatcaa
gggggcatgatgggaactggacctccttatggacaagggattaatagtatggctggcatg
atcaaccctcagggacccccatattccatgggtggaaccatggccaacaattctgcaggg
atggcagccagcccagagatgatgggccttggggatgtaaagttaactccagcccccaaa
atgaacaacaaggcagatgggacacccaagacagaatccaaatccaagaaatccagttct
tctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagagg
aagatgtgggtggaccgttatctggccttcactgaggagaaggccatgggcatgacaaat
ctgcctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggag
attggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcaaccaacctc
aatgtgggcacatcaagcagtgctgccagctccttgaaaaagcagtatatccagtgtctc
tatgcctttgaatgcaagattgaacggggagaagaccctcccccagacatctttgcagct
gctgattccaagaagtcccagcccaagatccagcctccctctcctgcgggatcaggatct
atgcaggggccccagactccccagtcaaccagcagttccatggcagaaggaggagactta
aagccaccaactccagcatccacaccacacagtcagatccccccattgccaggcatgagg
agcaattcagttgggatccaggatgcctttaatgatggaagtgactccacattccagaag
cggaattccatgactccaaaccctgggtatcagcccagtatgaatacctctgacatgatg
gggcgcatgtcctatgagccaaataaggatccttatggcagcatgaggaaagctccaggg
agtgatcccttcatgtcctcagggcagggccccaacggcgggatgggtgacccctacagt
cgtgctgccggccctgggctaggaaatgtggcgatgggaccacgacagcactatccctat
ggaggtccttatgacagagtgaggacggagcctggaatagggcctgagggaaacatgagc
actggggccccacagccgaatctcatgccttccaacccagactcggggatgtattctcct
agccgctaccccccgcagcagcagcagcagcagcagcagcagcaacgacatgattcctat
ggcaatcagttctccacccaaggcaccccttctggcagccccttccccagccagcagact
acaatgtatcaacagcaacagcagaattacaagcggccaatggatggcacatatggccct
cctgccaagcggcacgaaggggagatgtacagcgtgccatacagcactgggcaggggcag
cctcagcagcagcagttgcccccagcccagccccagcctgccagccagcaacaagctgcc
cagccttcccctcagcaagatgtatacaaccagtatggcaatgcctatcctgccactgcc
acagctgctactgagcgccgaccagcaggcggcccccagaaccaatttccattccagttt
ggccgagaccgtgtctctgcaccccctggcaccaatgcccagcaaaacatgccaccacaa
atgatgggcggccccatacaggcatcagctgaggttgctcagcaaggcaccatgtggcag
gggcgtaatgacatgacctataattatgccaacaggcagagcacgggctctgccccccag
ggccccgcctatcatggcgtgaaccgaacagatgaaatgctgcacacagatcagagggcc
aaccacgaaggctcgtggccttcccatggcacacgccagcccccatatggtccctctgcc
cctgtgccccccatgacaaggccccctccatctaactaccagcccccgccaagcatgcag
aatcacattcctcaggtatccagccctgctcccctgccccggccaatggagaaccgcacc
tctcctagcaagtctccattcctgcactctgggatgaaaatgcagaaggcaggtccccca
gtacctgcctcacacatagcacctgcccctgtgcagccccccatgattcggcgggatatc
accttcccacctggctctgttgaagccacacagcctgtgttgaagcagaggaggcggctc
acaatgaaagacattggaaccccggaggcatggcgggtaatgatgtccctcaagtctggt
ctcctggcagagagcacatgggcattagataccatcaacatcctgctgtatgatgacaac
agcatcatgacctttaacctcagtcagctcccagggttgctagagctccttgtagaatat
ttccgacgatgcctgattgagatctttggcattttaaaggagtatgaggtgggtgaccca
ggacagagaacgctactggatcctgggaggttcagcaaggtgtctagtccagctcccatg
gagggtggggaagaagaagaagaacttctaggtcctaaactagaagaggaagaagaagag
gaagtagttgaaaatgatgaggagatagccttttcaggcaaggacaagccagcttcagag
aatagtgaggagaagctgatcagtaagtttgacaagcttccagtaaagatcgtacagaag
aatgacccatttgtggtggactgctcagataagcttgggcgtgtgcaggagtttgacagt
ggcctgctgcactggcggattggtgggggggacaccactgagcatatccagacccacttt
gagagcaagacagagctgctgccttcccggcctcacgcaccctgcccaccagcccctcgg
aagcatgtgacaacagcagagggtacaccagggacaacagaccaggaggggcccccacct
gatggacctccagaaaaacggatcacagccactatggatgacatgttgtctactcggtct
agcaccttgaccgaggatggagctaagagttcagaggccatcaaggagagcagcaagttt
ccatttggcattagcccagcacagagccaccggaacatcaagatcctagaggacgaaccc
cacagtaaggatgagaccccactgtgtacccttctggactggcaggattctcttgccaag
cgctgcgtctgtgtctccaataccattcgaagcctgtcatttgtgccaggcaatgacttt
gagatgtccaaacacccagggctgctgctcatcctgggcaagctgatcctgctgcaccac
aagcacccagaacggaagcaggcaccactaacttatgaaaaggaggaggaacaggaccaa
ggggtgagctgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaaaac
accttggttacactcgccaacatctcggggcagttggacctatctccataccccgagagc
atttgcctgcctgtcctggacggactcctacactgggcagtttgcccttcagctgaagcc
caggaccccttttccaccctgggccccaatgccgtcctttccccgcagagactggtcttg
gaaaccctcagcaaactcagcatccaggacaacaatgtggacctgattctggccacaccc
cccttcagccgcctggagaagttgtatagcactatggtgcgcttcctcagtgaccgaaag
aacccggtgtgccgggagatggctgtggtactgctggccaacctggctcagggggacagc
ctggcagctcgtgccattgcagtgcagaagggcagtatcggcaacctcctgggcttccta
gaggacagccttgccgccacacagttccagcagagccaggccagcctcctccacatgcag
aacccaccctttgagccaactagtgtggacatgatgcggcgggctgcccgcgcgctgctt
gccttggccaaggtggacgagaaccactcagagtttactctgtacgaatcacggctgttg
gacatctcggtatcaccgttgatgaactcattggtttcacaagtcatttgtgatgtactg
tttttgattggccagtcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

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